FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.296e-30
Identity = 71/167 (42.51%), Postives = 103/167 (61.68%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGIL-KSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            EL E T NF ++  +GEG +G+V+ G + K     AIK+LD +  Q   EF+ +V  +S   H N V+L+G+C +G  R+L YE+   GSL D LH      G +P   L W  R+KIA GAA+GLEYLH++  P +I+RD+K SN+L+ +D   K++DF L+   P
Sbjct:   95 ELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPS--GKKP---LDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGP 256          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5188_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.917e-30
Identity = 68/169 (40.24%), Postives = 106/169 (62.72%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            I+  E+ ++T NF    ++G+G +G VY+G L+    A      +S Q  +EF A+V ++ R+ H N V L+GYC DG +  L YE+ +NG L + + G++G      G VL+W+ R++IAV AA+GLEYLH    P ++HRD+K++N+L+ +   AK+ADF LS   P
Sbjct:  556 ITYPEVLKMTNNF--ERVLGKGGFGTVYHGNLEDTQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRNLVGLVGYCDDGDNLALIYEYMANGDLKENMSGKRG------GNVLTWENRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFP 716          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK3_ARATH (Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana GN=CRK3 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.917e-30
Identity = 71/170 (41.76%), Postives = 107/170 (62.94%), Query Frame = 2
Query:  218 SVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            S + L+  T+ F     +G+G  G VY G+L +G   A+K+L  + KQ  + F  +V+++S++ H+N V+LLG  + G   +L YE+ +N SLHD L  RK V   QP   L+W +R KI +G A+G+ YLHE+++  IIHRDIK SN+L+ DD   +IADF L+   P+
Sbjct:  312 SYENLERATDYFSDKNKLGQGGSGSVYKGVLTNGKTVAVKRLFFNTKQWVDHFFNEVNLISQVDHKNLVKLLGCSITGPESLLVYEYIANQSLHDYLFVRKDV---QP---LNWAKRFKIILGTAEGMAYLHEESNLRIIHRDIKLSNILLEDDFTPRIADFGLARLFPE 475          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.034e-30
Identity = 71/176 (40.34%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            ++    ++ ++K  T+NF     IGEG +G VY G L  G   A+K+L A S+Q + EF+ ++ M+S L+H N V+L G CV+G   +L YE+  N  L   L G+      +    L W  R KI +G AKGL +LHE++   I+HRDIK+SNVL+  D  AKI+DF L+    D
Sbjct:  661 LQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLK----LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDD 832          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SRF6_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana GN=SRF6 PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.034e-30
Identity = 69/180 (38.33%), Postives = 103/180 (57.22%), Query Frame = 2
Query:  191 VQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD---EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            V P  V   SV +L+  T +F  + L+GEG++GRVY      G   A+KK+D+S  P    ++F+  VS ++ L H N  +L+GYC +    ++ YEF  NGSLHD LH        +    L W  RVKIA+G A+ LEYLHE   P I+ ++IKS+N+L+  +    ++D  L++  P
Sbjct:  396 VVPSNVRLYSVADLQIATGSFSVDNLLGEGTFGRVYRAEFDDGKVLAVKKIDSSALPHGMTDDFIEMVSKIANLDHPNVTKLVGYCAEHGQHLVVYEFHKNGSLHDFLH-----LSEEESKALVWNSRVKIALGTARALEYLHEVCSPSIVDKNIKSANILLDSELNPHLSDSGLASFLP 570          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 130.568 bits (327), Expect = 9.034e-30
Identity = 75/167 (44.91%), Postives = 100/167 (59.88%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP-VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +S D+L + T +F    +IG G +G VY   L  G   AIKKL     Q + EF A+V  +SR +H N V L G+C     R+L Y +  NGSL   LH R        GP +L W+ R++IA GAAKGL YLHE  DPHI+HRDIKSSN+L+ ++  + +ADF L+
Sbjct:  722 LSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPDGKKVAIKKLSGDCGQIEREFEAEVETLSRAQHPNLVLLRGFCFYKNDRLLIYSYMENGSLDYWLHERND------GPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLA 882          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.180e-29
Identity = 67/168 (39.88%), Postives = 104/168 (61.90%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            E++  T+NF     IG G +G+VY G L+ G   AIK+    S+Q   EF  ++ M+SRL+H + V L+G+C +    +L YE+ +NG+L   L G          P LSW+QR++  +G+A+GL YLH  ++  IIHRD+K++N+L+ ++ VAK++DF LS   P M
Sbjct:  512 EIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSNL-------PPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSM 672          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.541e-29
Identity = 65/167 (38.92%), Postives = 105/167 (62.87%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            +K+ T NF  +  IG G +G+VY G L  G   A+K+ +  S+Q   EF  ++ M+S+ +H + V L+GYC +    +L YE+  NG++   L+G  G+      P L+W+QR++I +GAA+GL YLH      +IHRD+KS+N+L+ ++ +AK+ADF LS   P++
Sbjct:  478 VKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYG-SGL------PSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTGPEL 637          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.541e-29
Identity = 70/182 (38.46%), Postives = 109/182 (59.89%), Query Frame = 2
Query:  170 KGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSL-HDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            K  + + ++  ++  +  D ++  T +F  +  +GEG +G VY G+L  G   A+K+L   S Q D EF+ +VS+V++L+H N V+LLG+C+ G  R+L YEF  N SL H I    + +       +L W+ R +I  G A+GL YLHE +   I+HRD+K+SNVL+ D    KIADF ++
Sbjct:  317 KDLEELMIKDAQLLQLDFDTIRLATNDFSRDNQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRM-------ILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMA 491          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.013e-29
Identity = 67/163 (41.10%), Postives = 99/163 (60.74%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQP--DEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            EL+  T+NF    ++G+G +G+VY G+L      A+K+L   + P  D  F  +V M+S   H N ++L+G+C   T R+L Y F  N SL    H  + +K   P  VL W+ R +IA+GAA+G EYLHE  +P IIHRD+K++NVL+ +D  A + DF L+
Sbjct:  282 ELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSL---AHRLREIKAGDP--VLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLA 439          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLCK7_ARATH5.296e-3042.51Probable serine/threonine-protein kinase RLCKVII O... [more]
Y5188_ARATH6.917e-3040.24Probable LRR receptor-like serine/threonine-protei... [more]
CRK3_ARATH6.917e-3041.76Cysteine-rich receptor-like protein kinase 3 OS=Ar... [more]
Y1765_ARATH9.034e-3040.34Probable LRR receptor-like serine/threonine-protei... [more]
SRF6_ARATH9.034e-3038.33Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsi... [more]
PSKR1_ARATH9.034e-3044.91Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y1357_ARATH1.180e-2939.88Probable receptor-like protein kinase At1g30570 OS... [more]
HERK_ARATH1.541e-2938.92Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK41_ARATH1.541e-2938.46Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
Y5129_ARATH2.013e-2941.10Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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