FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: STK4_CERAE (Serine/threonine-protein kinase 4 OS=Cercopithecus aethiops GN=STK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 53/169 (31.36%), Postives = 81/169 (47.93%), Query Frame = 2
Query:  233 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 736
            K+  E F     +GEGSYG VY  I K +G   AIK++       +E + ++S++ +    + V+  G     T   +  E+   GS+ DI+  R           L+  +   I     KGLEYLH       IHRDIK+ N+L+  +  AK+ADF ++ Q  D  A+
Sbjct:   24 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN--------KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 180          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: STK4_BOVIN (Serine/threonine-protein kinase 4 OS=Bos taurus GN=STK4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 53/169 (31.36%), Postives = 81/169 (47.93%), Query Frame = 2
Query:  233 KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 736
            K+  E F     +GEGSYG VY  I K +G   AIK++       +E + ++S++ +    + V+  G     T   +  E+   GS+ DI+  R           L+  +   I     KGLEYLH       IHRDIK+ N+L+  +  AK+ADF ++ Q  D  A+
Sbjct:   24 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN--------KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 180          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: STK3_RAT (Serine/threonine-protein kinase 3 OS=Rattus norvegicus GN=Stk3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 56/176 (31.82%), Postives = 84/176 (47.73%), Query Frame = 2
Query:  215 ISVDEL-KEITENFGTNALIGEGSYGRVYYGILK-SGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAAR 736
            +S D L K+  E F     +GEGSYG V+  I K SG   AIK++       +E + ++S++ +      V+  G     T   +  E+   GS+ DI+  R           L+  +   I     KGLEYLH       IHRDIK+ N+L+  +  AK+ADF ++ Q  D  A+
Sbjct:   14 LSEDSLTKQPEEVFDVLEKLGEGSYGSVFKAIHKESGQVVAIKQVPVESDV-QEIIKEISIMQQCDSPYVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR--------NKTLTEDEIATILKSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 177          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SRC_RAT (Proto-oncogene tyrosine-protein kinase Src OS=Rattus norvegicus GN=Src PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 54/198 (27.27%), Postives = 91/198 (45.96%), Query Frame = 2
Query:  143 AYHASEAAPKGAQAVKVQPIEVP---AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            AY++  A     +   V P   P    ++ D  +   E+      +G+G +G V+ G        AIK L       E FL +  ++ +L+HE  VQL  Y V     + +  E+ + GSL D L G       + G  L   Q V ++   A G+ Y+      + +HRD++++N+L+ ++ V K+ADF L+    D
Sbjct:  231 AYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKG-------ETGKYLRLPQLVDMSAQIASGMAYVDRM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 416          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 45/155 (29.03%), Postives = 85/155 (54.84%), Query Frame = 2
Query:  266 LIGEGSYGRVYYGILKSGHAAAIKKLD----ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGP----VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDL 706
            ++G    G VY  +L++G A A+++++    A+ +P +EF  +V  +++L+H N V++ G+C     ++L  ++  NGSL       K    +         L+++ R+KIA G A+GL Y++EK     +H +IK +N+L+  ++   I D  L
Sbjct:  476 ILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKP-KEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINEKKQ---VHGNIKPNNILLNAENEPIITDLGL 626          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: MLTK_MOUSE (Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 2
Query:  272 GEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            G GS+G VY    +      A+KKL   ++  E       ++S L H N +Q  G  ++  +  +  E+AS GSL+D ++  +  +      +++W      A   AKG+ YLH +A   +IHRD+KS NV+I  D V KI DF  S
Sbjct:   23 GGGSFGSVYRAKWISQDKEVAVKKLLKIEKEAE-------ILSVLSHRNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEE-MDMEHIMTW------ATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGAS 155          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: LCK_HUMAN (Proto-oncogene tyrosine-protein kinase LCK OS=Homo sapiens GN=LCK PE=1 SV=6)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 43/152 (28.29%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  269 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            +G G +G V+ G        A+K L       + FLA+ +++ +L+H+  V+L          ++  E+  NGSL D L    G+K       L+  + + +A   A+G+ ++ E+   + IHRD++++N+L+ D    KIADF L+    D
Sbjct:  251 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 391          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: LCK_AOTNA (Proto-oncogene tyrosine-protein kinase LCK OS=Aotus nancymaae GN=LCK PE=2 SV=4)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 43/152 (28.29%), Postives = 77/152 (50.66%), Query Frame = 2
Query:  269 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            +G G +G V+ G        A+K L       + FLA+ +++ +L+H+  V+L          ++  E+  NGSL D L    G+K       L+  + + +A   A+G+ ++ E+   + IHRD++++N+L+ D    KIADF L+    D
Sbjct:  251 LGAGQFGEVWMGYYNDHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIK-------LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIED 391          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FGFR1_RAT (Basic fibroblast growth factor receptor 1 OS=Rattus norvegicus GN=Fgfr1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 53/165 (32.12%), Postives = 86/165 (52.12%), Query Frame = 2
Query:  269 IGEGSYGRVYY----GILKSGH------AAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +GEG +G+V      G+ K         A  + K DA+++   + ++++ M+  + KH+N + LLG C       +  E+AS G+L + L  R+  G++        P   LS +  V  A   A+G+EYL  K     IHRD+ + NVL+ +D+V KIADF L+
Sbjct:  484 LGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 645          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FGFR1_MOUSE (Basic fibroblast growth factor receptor 1 OS=Mus musculus GN=Fgfr1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.712e-12
Identity = 53/165 (32.12%), Postives = 86/165 (52.12%), Query Frame = 2
Query:  269 IGEGSYGRVYY----GILKSGH------AAAIKKLDASKQPDEEFLAQVSMVSRL-KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRK--GVK-----GAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +GEG +G+V      G+ K         A  + K DA+++   + ++++ M+  + KH+N + LLG C       +  E+AS G+L + L  R+  G++        P   LS +  V  A   A+G+EYL  K     IHRD+ + NVL+ +D+V KIADF L+
Sbjct:  484 LGEGCFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLA 645          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
STK4_CERAE1.712e-1231.36Serine/threonine-protein kinase 4 OS=Cercopithecus... [more]
STK4_BOVIN1.712e-1231.36Serine/threonine-protein kinase 4 OS=Bos taurus GN... [more]
STK3_RAT1.712e-1231.82Serine/threonine-protein kinase 3 OS=Rattus norveg... [more]
SRC_RAT1.712e-1227.27Proto-oncogene tyrosine-protein kinase Src OS=Ratt... [more]
RPKL_ARATH1.712e-1229.03Receptor protein kinase-like protein At4g34220 OS=... [more]
MLTK_MOUSE1.712e-1233.33Mitogen-activated protein kinase kinase kinase MLT... [more]
LCK_HUMAN1.712e-1228.29Proto-oncogene tyrosine-protein kinase LCK OS=Homo... [more]
LCK_AOTNA1.712e-1228.29Proto-oncogene tyrosine-protein kinase LCK OS=Aotu... [more]
FGFR1_RAT1.712e-1232.12Basic fibroblast growth factor receptor 1 OS=Rattu... [more]
FGFR1_MOUSE1.712e-1232.12Basic fibroblast growth factor receptor 1 OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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