FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: MYO3A_HUMAN (Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 54/182 (29.67%), Postives = 93/182 (51.10%), Query Frame = 2
Query:  197 PIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLK-HENFVQLLGYC-----VDGTSRVLAYEFASNGSLHDILHG--RKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQ 715
            P+    I  D   + ++ +     IG+G+YG+V+  +  K+G  AA+K LD     DEE  A+ +++  L  H N V+  G       V+G    L  E  S GS+ D++ G  ++G + ++P  ++++     I   A  GL++LH       IHRD+K +N+L+  +   K+ DF +S Q
Sbjct:    3 PLIGKTIIFDNFPDPSDTWEITETIGKGTYGKVFKVLNKKNGQKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVRFYGIYFKKDKVNGDKLWLVLELCSGGSVTDLVKGFLKRGERMSEP--LIAY-----ILHEALMGLQHLHNNKT---IHRDVKGNNILLTTEGGVKLVDFGVSAQ 174          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: MATK_MOUSE (Megakaryocyte-associated tyrosine-protein kinase OS=Mus musculus GN=Matk PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 50/151 (33.11%), Postives = 82/151 (54.30%), Query Frame = 2
Query:  263 ALIGEGSYGRVYYGILKSGHAAAIK--KLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            A IGEG +G V  G    G   A+K  K D + Q    FL + +++++L+H N V+LLG  +      +  E  S G+L + L  R          ++S  Q ++ A+  A+G+EYL  K    ++HRD+ + N+L+ +D VAK++DF L+
Sbjct:  237 AQIGEGEFGAVLQGEYL-GQKVAVKNIKCDVTAQA---FLDETAVMTKLQHRNLVRLLGVILHH-GLYIVMEHVSKGNLVNFLRTRGRA-------LVSTSQLLQFALHVAEGMEYLESKK---LVHRDLAARNILVSEDLVAKVSDFGLA 372          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: INSR_AEDAE (Insulin-like receptor OS=Aedes aegypti GN=InR PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = 2
Query:  269 IGEGSYGRVYYGIL------KSGHAAAIKKLD--ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDIL--HGRKGVKGAQPGPVL-SWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +G+GS+G VY GIL      K     AIK ++  A+ +  + FL + S++ +    + V+LLG    G   ++  E  +NG L   L  H      G  P P   + +Q +++A+  A G+ YL  K     +HRD+ + N ++ DD   KI DF ++
Sbjct: 1031 LGQGSFGMVYKGILTQLRGEKCNQPCAIKTVNESATAREKDSFLLEASVMKQFNTHHVVRLLGVVSQGDPTLVIMELMANGDLKSYLRRHRPDYENGEDPSPQPPTLRQIIQMAIEIADGMAYLSAKK---FVHRDLAARNCMVADDMTVKIGDFGMT 1185          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FYN_RAT (Proto-oncogene tyrosine-protein kinase Fyn OS=Rattus norvegicus GN=Fyn PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  269 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            +G G +G V+ G        AIK L       E FL +  ++ +LKH+  VQL  Y V     + +  E+ + GSL D L   +       G  L     V +A   A G+ Y+      + IHRD++S+N+L+ +  + KIADF L+    D
Sbjct:  277 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGE-------GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIED 417          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FYN_PIG (Proto-oncogene tyrosine-protein kinase Fyn OS=Sus scrofa GN=FYN PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  269 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            +G G +G V+ G        AIK L       E FL +  ++ +LKH+  VQL  Y V     + +  E+ + GSL D L   +       G  L     V +A   A G+ Y+      + IHRD++S+N+L+ +  + KIADF L+    D
Sbjct:  277 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGE-------GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIED 417          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FYN_HUMAN (Proto-oncogene tyrosine-protein kinase Fyn OS=Homo sapiens GN=FYN PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  269 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            +G G +G V+ G        AIK L       E FL +  ++ +LKH+  VQL  Y V     + +  E+ + GSL D L   +       G  L     V +A   A G+ Y+      + IHRD++S+N+L+ +  + KIADF L+    D
Sbjct:  277 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGE-------GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIED 417          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FYN_BOVIN (Proto-oncogene tyrosine-protein kinase Fyn OS=Bos taurus GN=FYN PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 47/153 (30.72%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  269 IGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            +G G +G V+ G        AIK L       E FL +  ++ +LKH+  VQL  Y V     + +  E+ + GSL D L   +       G  L     V +A   A G+ Y+      + IHRD++S+N+L+ +  + KIADF L+    D
Sbjct:  277 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDFLKDGE-------GRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIADFGLARLIED 417          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: FGFR1_DROME (Fibroblast growth factor receptor homolog 1 OS=Drosophila melanogaster GN=htl PE=2 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 2
Query:  263 ALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRL--KHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGV------KGAQPGP-----VLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            A +GEG++GRV    + +   A     +     D   L +   V ++  +H N + LLG C       +  E+A +G+L D L+  +          +QP P     V++ +  +K A   A+G++YL   A    IHRD+ + NVL+ DD V KIADF L+
Sbjct:  420 ATLGEGAFGRVVMAEVNNAIVAVKMVKEGHTDDDIASLVREMEVMKIIGRHINIINLLGCCSQNGPLYVIVEYAPHGNLKDFLYKNRPFGRDQDRDSSQPPPSPPAHVITEKDLIKFAHQIARGMDYL---ASRRCIHRDLAARNVLVSDDYVLKIADFGLA 578          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: BCK1_YEAST (Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS=Saccharomyces cerevisiae GN=BCK1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11
Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = 2
Query:  266 LIGEGSYGRVYYGI-LKSGHAAAIKKLDASKQPD---------EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDM 727
            +IG+GS+G VY  + + +G   A+K+++  K            E   ++VS +  L H N VQ LG+        L  E+ + GS+  ++     + G    P++       +     KGL YLH K    I+HRD+K+ N+L+  D + KI+DF +S ++ D+
Sbjct: 1180 MIGKGSFGAVYLCLNVTTGEMMAVKQVEVPKYSSQNEAILSTVEALRSEVSTLKDLDHLNIVQYLGFENKNNIYSLFLEYVAGGSVGSLIR----MYGRFDEPLIK-----HLTTQVLKGLAYLHSKG---ILHRDMKADNLLLDQDGICKISDFGISRKSKDI 1331          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: YES_MOUSE (Proto-oncogene tyrosine-protein kinase Yes OS=Mus musculus GN=Yes1 PE=1 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11
Identity = 49/161 (30.43%), Postives = 78/161 (48.45%), Query Frame = 2
Query:  245 ENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRV-LAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            E+      +G+G +G V+ G        AIK L       E FL +  ++ +L+H+  V L  Y V     + +  EF S GSL D L  ++G      G  L   Q V +A   A G+ Y+      + IHRD++++N+L+ ++ + KIADF L+    D
Sbjct:  273 ESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPL--YAVVSEEPIYIVTEFMSKGSLLDFL--KEG-----DGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGENLICKIADFGLARLIED 421          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MYO3A_HUMAN1.449e-1129.67Myosin-IIIa OS=Homo sapiens GN=MYO3A PE=1 SV=2[more]
MATK_MOUSE1.449e-1133.11Megakaryocyte-associated tyrosine-protein kinase O... [more]
INSR_AEDAE1.449e-1130.38Insulin-like receptor OS=Aedes aegypti GN=InR PE=2... [more]
FYN_RAT1.449e-1130.72Proto-oncogene tyrosine-protein kinase Fyn OS=Ratt... [more]
FYN_PIG1.449e-1130.72Proto-oncogene tyrosine-protein kinase Fyn OS=Sus ... [more]
FYN_HUMAN1.449e-1130.72Proto-oncogene tyrosine-protein kinase Fyn OS=Homo... [more]
FYN_BOVIN1.449e-1130.72Proto-oncogene tyrosine-protein kinase Fyn OS=Bos ... [more]
FGFR1_DROME1.449e-1130.86Fibroblast growth factor receptor homolog 1 OS=Dro... [more]
BCK1_YEAST1.449e-1129.27Serine/threonine-protein kinase BCK1/SLK1/SSP31 OS... [more]
YES_MOUSE1.892e-1130.43Proto-oncogene tyrosine-protein kinase Yes OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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