FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.456e-28
Identity = 71/169 (42.01%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  206 VPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            + + S+ ++K  T NF +   IGEG +G VY G L  G   A+K+L   SKQ + EFL ++ M+S L H N V+L G CV+G   +L YEF  N SL   L G +  +       L W  R KI +G A+GL YLHE++   I+HRDIK++NVL+      KI+DF L+
Sbjct:  609 IASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLR-----LDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLA 772          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 8.456e-28
Identity = 62/171 (36.26%), Postives = 101/171 (59.06%), Query Frame = 2
Query:  203 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++   S+ EL+  ++NF    ++G G +G+VY G L  G   A+K+L   +    E  F  +V M+S   H N ++L G+C+  T R+L Y + +NGS+   L  R      +  P L W +R +IA+G+A+GL YLH+  DP IIHRD+K++N+L+ ++  A + DF L+
Sbjct:  273 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-----ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 438          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.104e-27
Identity = 62/171 (36.26%), Postives = 100/171 (58.48%), Query Frame = 2
Query:  203 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++   S+ EL+  ++ F    ++G G +G+VY G L  G   A+K+L   + P  E  F  +V M+S   H N ++L G+C+  T R+L Y + +NGS+   L  R   +     P L W  R +IA+G+A+GL YLH+  DP IIHRD+K++N+L+ ++  A + DF L+
Sbjct:  286 QLKRFSLRELQVASDGFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQ-----PPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 451          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27
Identity = 65/165 (39.39%), Postives = 99/165 (60.00%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            E+ ++T+NF    ++G+G +G VY+G L     A      +S Q  +EF A+V ++ R+ H + V L+GYC DG +  L YE+   G L + + G+  V       VLSW+ R++IAV AA+GLEYLH    P ++HRD+K +N+L+ +   AK+ADF LS   P
Sbjct:  564 EVLKMTKNF--ERVLGKGGFGTVYHGNLDDTQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVN------VLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFP 720          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.460e-27
Identity = 61/171 (35.67%), Postives = 102/171 (59.65%), Query Frame = 2
Query:  203 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL--DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++   ++ EL   T+NF    ++G G +G+VY G L  G+  A+K+L  + +K  + +F  +V M+S   H N ++L G+C+  T R+L Y + +NGS+   L  R      +  P L W +R  IA+G+A+GL YLH+  D  IIHRD+K++N+L+ ++  A + DF L+
Sbjct:  278 QLKRFTLRELLVATDNFSNKNVLGRGGFGKVYKGRLADGNLVAVKRLKEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP-----EGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLA 443          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.460e-27
Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA-SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +  + LK  T+NF +   +G G +G VY G+   G   A+K+L   S Q D EF  ++ ++++L+H N V+L+G+C+ G  R+L YEF  N SL   +         +   +L W  R K+  G A+GL YLHE +   IIHRD+K+SN+L+  +   KIADF L+
Sbjct:  345 VHFETLKTATDNFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFD------TEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLA 504          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27
Identity = 63/172 (36.63%), Postives = 102/172 (59.30%), Query Frame = 2
Query:  203 EVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEE--FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPV-LSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            ++   S+ EL+  T++F    ++G G +G+VY G L  G   A+K+L   + P  E  F  +V M+S   H N ++L G+C+  T R+L Y + +NGS+   L  R       P  + L+W  R +IA+G+A+GL YLH+  DP IIHRD+K++N+L+ ++  A + DF L+
Sbjct:  289 QLKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP------PSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 454          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27
Identity = 71/170 (41.76%), Postives = 101/170 (59.41%), Query Frame = 2
Query:  236 EITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS-KQPDEE----------FLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG-RKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            EI +      +IG GS G+VY   L+ G   A+KKL+ S K  D+E          F A+V  +  ++H++ V+L   C  G  ++L YE+  NGSL D+LHG RKG      G VL W +R++IA+ AA+GL YLH    P I+HRD+KSSN+L+  D  AK+ADF ++
Sbjct:  678 EIADCLDEKNVIGFGSSGKVYKVELRGGEVVAVKKLNKSVKGGDDEYSSDSLNRDVFAAEVETLGTIRHKSIVRLWCCCSSGDCKLLVYEYMPNGSLADVLHGDRKG------GVVLGWPERLRIALDAAEGLSYLHHDCVPPIVHRDVKSSNILLDSDYGAKVADFGIA 841          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27
Identity = 76/211 (36.02%), Postives = 122/211 (57.82%), Query Frame = 2
Query:  122 SSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILK----------SGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            S  G+ G+  AS +     +   +Q   +   S+ ELK  T NF  ++++GEG +G V+ G +           +G   A+K+L+    Q   E+LA+++ + +L H N V+L+GYC++   R+L YEF + GSL + L  R+G    QP   LSW  RV++A+GAA+GL +LH  A P +I+RD K+SN+L+  +  AK++DF L+   P
Sbjct:   25 SRDGSKGSSTASFSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLF-RRGT-FYQP---LSWNTRVRMALGAARGLAFLH-NAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGP 229          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27
Identity = 69/192 (35.94%), Postives = 108/192 (56.25%), Query Frame = 2
Query:  155 SEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE--EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGR-KGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            S   P+G+  + +  +++   + D++  +TEN     +IG G+   VY    K+    AIK++  ++ P    EF  ++  +  ++H N V L GY +     +L Y++  NGSL D+LHG  K VK       L W+ R+KIAVGAA+GL YLH    P IIHRDIKSSN+L+  +  A+++DF ++   P
Sbjct:  619 SSKQPEGSTKLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASSTVYKCTSKTSRPIAIKRI-YNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKKVK-------LDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIP 802          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y1534_ARATH8.456e-2842.01Probable LRR receptor-like serine/threonine-protei... [more]
BAK1_ARATH8.456e-2836.26BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK1_ARATH1.104e-2736.26Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y5189_ARATH1.884e-2739.39Probable LRR receptor-like protein kinase At1g5189... [more]
SERK4_ARATH2.460e-2735.67Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
CRK29_ARATH2.460e-2737.95Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
SERK2_ARATH3.213e-2736.63Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
RLK5_ARATH3.213e-2741.76Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]
NAK_ARATH3.213e-2736.02Probable serine/threonine-protein kinase NAK OS=Ar... [more]
ERL2_ARATH3.213e-2735.94LRR receptor-like serine/threonine-protein kinase ... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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