FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 69/182 (37.91%), Postives = 104/182 (57.14%), Query Frame = 2
Query:  170 KGAQAVKVQPIE--VPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            KG + VKV   +  V  + + +L + TE F  + +I  G  G +Y G L+ G    IK+L  S++ ++EF A++  +  +K+ N V LLGYCV    R+L YE+ +NG L+D LH        +    L W  R+KIA+G AKGL +LH   +P IIHR+I S  +L+  +   KI+DF L+
Sbjct:  274 KGQKGVKVFMFKKSVSKMKLSDLMKATEEFKKDNIIATGRTGTMYKGRLEDGSLLMIKRLQDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLH----PADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLA 451          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: SRF5_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsis thaliana GN=SRF5 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 63/166 (37.95%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  221 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS---KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            + +L+  T NF    L+GEGS GRVY      G   A+KK+D++       E     V  +S+++H+N  +L+GYC +    +L YE+  NGSLH+ LH    +      P L+W  RV+IA+G A+ +EYLHE   P ++H++IKSSN+L+  D   +++D+ LS
Sbjct:  394 LSDLQSATANFSPGNLLGEGSIGRVYRAKYSDGRTLAVKKIDSTLFDSGKSEGITPIVMSLSKIRHQNIAELVGYCSEQGHNMLVYEYFRNGSLHEFLH----LSDCFSKP-LTWNTRVRIALGTARAVEYLHEACSPSVMHKNIKSSNILLDADLNPRLSDYGLS 554          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            I+  E+  +T NF    +IGEG +G VY+G L      A+K L  +S Q  +EF A+V ++ R+ H N V L+GYC +     L YE+ +NG L   L G+ G        VL W+ R+ IAV  A GLEYLH    P ++HRD+KS N+L+ +   AK+ADF LS
Sbjct:  563 ITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQVAVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHG------DCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLS 720          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 66/175 (37.71%), Postives = 102/175 (58.29%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            ++V   + + +KE T+ +  N ++G+G  G VY GIL      AIKK         E+F+ +V ++S++ H N V+LLG C++    +L YEF S+G+L D LHG      +     L+W+ R+++AV  A  L YLH  A   IIHRDIK++N+L+ ++  AK+ADF  S   P
Sbjct:  393 VDVKIFTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKARLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHG------SMFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIP 561          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 65/161 (40.37%), Postives = 97/161 (60.25%), Query Frame = 2
Query:  230 LKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDE-EFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            L++ T +F     +GEG +G VY G+L  G   A+K+L  + Q  E EF  +  +V++L+H N V+LLGY ++GT R+L YEF  + SL       K +     G  L W+ R KI  G A+GL YLH+ +   IIHRD+K+SN+L+ ++   KIADF ++
Sbjct:  337 LQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLD------KFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMA 491          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 68/167 (40.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:  224 DELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            +E+  IT NF     +GEG +G VY+G +      A+K L ++S Q  ++F A+V ++ R+ H N V L+GYC +G   VL YE+ SNG+L      ++ + G      LSW+ R++IA   A+GLEYLH    P +IHRDIKS N+L+ ++  AK+ DF LS   P
Sbjct:  584 EEVAVITNNF--ERPLGEGGFGVVYHGNVNDNEQVAVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNL------KQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFP 742          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 61/163 (37.42%), Postives = 93/163 (57.06%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDA--SKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            EL   T+ F + +++G G +G VY G    G   A+K+L        + +F  ++ M+S   H N ++L+GYC   + R+L Y + SNGS+   L  +         P L W  R KIA+GAA+GL YLHE+ DP IIHRD+K++N+L+ +   A + DF L+
Sbjct:  291 ELHVATDGFSSKSILGAGGFGNVYRGKFGDGTVVAVKRLKDVNGTSGNSQFRTELEMISLAVHRNLLRLIGYCASSSERLLVYPYMSNGSVASRLKAK---------PALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLA 444          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  221 VDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYC-VDGTS---RVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 739
            ++EL++ T NF     IG G +G VY G+L  G   A+KK+  S+ Q D EF  +V ++S LKH N V L G   VD  S   R L Y++ SNG+L D L  R    G      LSW QR  I +  AKGL YLH    P I HRDIK +N+L+  D  A++ADF L+ Q+ +  + L
Sbjct:  285 IEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPR----GETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHL 458          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: WAK5_ARATH (Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 64/175 (36.57%), Postives = 104/175 (59.43%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPD-EEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            ++V   + + +KE T+ +  + ++G+G  G VY GIL+     AIKK     +   E+F+ +V ++S++ H N V+LLG C++    +L YEF S+G+L D LHG      +     L+W+ R++IA+  A  L YLH  A   IIHRD+K++N+L+ ++  AK+ADF  S   P
Sbjct:  391 VDVKIFTEEGMKEATDGYNESRILGQGGQGTVYKGILQDNSIVAIKKARLGDRSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHG------SMFDSSLTWEHRLRIAIEVAGTLAYLHSYASIPIIHRDVKTANILLDENLTAKVADFGASRLIP 559          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 69/176 (39.20%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  200 IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK--LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            ++V   + D +K+ T  +  + ++G+G  G VY GIL      AIKK  L  S Q  E+F+ +V ++S++ H N V+LLG C++    +L YEF +NG+L D LHG      +     L+W+ R+KIA+  A  L YLH  A   IIHRDIK++N+L+  +  AK+ADF  S   P
Sbjct:  392 VDVKIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQV-EQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHG------SMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFGASRLIP 560          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5838_ARATH4.197e-2737.91Probably inactive leucine-rich repeat receptor-lik... [more]
SRF5_ARATH4.197e-2737.95Protein STRUBBELIG-RECEPTOR FAMILY 5 OS=Arabidopsi... [more]
Y5169_ARATH5.481e-2741.57Probable LRR receptor-like serine/threonine-protei... [more]
WAK4_ARATH5.481e-2737.71Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
CRK26_ARATH5.481e-2740.37Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
Y4245_ARATH7.158e-2740.72Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH7.158e-2737.42Probable LRR receptor-like serine/threonine-protei... [more]
Y1105_ARATH7.158e-2742.13Probable receptor-like protein kinase At1g11050 OS... [more]
WAK5_ARATH7.158e-2736.57Wall-associated receptor kinase 5 OS=Arabidopsis t... [more]
WAK1_ARATH7.158e-2739.20Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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