FC931361
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.017e-45 Identity = 88/157 (56.05%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFE 634 +LFK +++GDSAVGKSNLL ++ F P+S TIGVEF ++S+ I+ K++K QIWDTAGQE+FR++T AYYRGAV A+IVYDITRR +F+S++ WL + + S V +L+GNK DLE+ R VST E K AE GL F ETSA + NV AFE Sbjct: 23 HLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFE 179
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.563e-44 Identity = 86/156 (55.13%), Postives = 117/156 (75.00%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAF 631 YL KIV+IGDS VGKSNLLSRY +NEF+ +TIGVEF T++++ID K +K Q+WDTAGQE++ ++T +YY+GA+GALIVY+I R +F+++ +WL + + ++ MLVGNK DL+ R VST EGK AE + F+ETSALDS NV+ AF Sbjct: 10 YLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAF 165
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.666e-44 Identity = 81/171 (47.37%), Postives = 124/171 (72.51%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRKV 676 YLFK+++IGDS VGK+ L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +F++I W+ ++ H+ V +M++GNKCD R VS E+G+ LA + G+ FMETSA + N++NAF + R+I + +K+ Sbjct: 7 YLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKL 177
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.013e-43 Identity = 87/179 (48.60%), Postives = 128/179 (71.51%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRKVLNSDSYKA 700 YLFK+++IGDS VGKS LL R+A + + +TIGV+F+ +++E DGK +K QIWDTAGQERFR +TS+YYRGA G ++VYD+T + +F+++ +WL+E+ ++ V ++LVGNKCDL R VS E GK+LA+ G+ F+ETSA D+TNV+ AF + EI ++ + + S A Sbjct: 7 YLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPA 185
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43 Identity = 80/163 (49.08%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREI 652 YL K+++IGDS VGKS LL R++ + F P TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G L++YD+T + +FD++ W ++ H+ V ++L+GNKCD E R VS E+G++LA+ G+ F+E SA + NV AF + REI Sbjct: 8 YLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.728e-43 Identity = 82/171 (47.95%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHVSRKV 676 YLFK+++IGDS VGK+ +L R++ + FN +TIG++F+ +++E+DGK +K QIWDTAGQERFR +T+AYYRGA+G ++VYDIT +FD+I W+ ++ H+ V +M++GNK D+ R VS E G+ LA G+ FMETSA + NV+NAF + R+I + +K+ Sbjct: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43 Identity = 85/156 (54.49%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAF 631 YLFK +IIGD+ VGKS LL ++ F P TIGVEF + + ID K +K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + H++ + MLVGNKCDL R VS EEG+ A+ GL FME SA + NV+ AF Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAF 160
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43 Identity = 85/156 (54.49%), Postives = 109/156 (69.87%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAF 631 YLFK +IIGD+ VGKS LL ++ F P TIGVEF + + ID K +K QIWDTAGQE FR++T +YYRGA GAL+VYDITRR TF+ ++ WL++ + H++ + MLVGNKCDL R VS EEG+ A+ GL FME SA + NV+ AF Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAF 160
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.568e-43 Identity = 79/167 (47.31%), Postives = 121/167 (72.46%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHV 664 YL K+++IGDS VGKS LL R++ + F P TIG++F+ +++E++GK +K QIWDTAGQERFR +T+AYYRGA+G L+VYD+T +F +I W+ ++ H+ +V +ML+GNKCD+ + V + GKSLA+ G+ F+ETSA +S NV+ AF + ++I + + Sbjct: 14 YLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRM 180
BLAST of FC931361 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.578e-43 Identity = 80/167 (47.90%), Postives = 121/167 (72.46%), Query Frame = 2 Query: 164 YLFKIVIIGDSAVGKSNLLSRYARNEFNPHSKATIGVEFQTQSMEIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIXQHV 664 +L K+++IGDS VGKS LL R++ F P ATIG++F+ +++E++GK +K QIWDTAGQERFR +T+AYYRGA+G L+VYD+T +F SI W+ ++ H+ +V +ML+GNKCD+ + V + GKSLA+ G+ F+ETSA +S NV+ AF + ++I + + Sbjct: 14 FLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRM 180 The following BLAST results are available for this feature:
BLAST of FC931361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931361 ID=FC931361; Name=FC931361; organism=Citrus clementina; type=EST; length=711bpback to top |