FC931370

Overview
NameFC931370
Unique NameFC931370
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.279e-52
Identity = 110/184 (59.78%), Postives = 122/184 (66.30%), Query Frame = 3
Query:  162 AAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            AA + +GKDY              T WS YRA IAEF+AT LFLYI+V TV+G            +  C  VG+ GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGLFLARK+SL RAL Y+V QCLGAICG G+VKGF                A GY+KG GL AEIIGTFVLVYTVFSAT
Sbjct:    7 AAAAHEGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSA-GYSKGTGLAAEIIGTFVLVYTVFSAT 189          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 5.589e-52
Identity = 110/177 (62.15%), Postives = 122/177 (68.93%), Query Frame = 3
Query:  183 KDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMG--------VVKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            KDY              T WS YRA IAEFIAT LFLYI+V TV+G        V  ++  CS VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAICG G+VKGF               ++ GY+KG GLGAEIIGTFVLVYTVFSAT
Sbjct:   18 KDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQ-SSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSAT 193          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.731e-51
Identity = 110/186 (59.14%), Postives = 120/186 (64.52%), Query Frame = 3
Query:  156 GTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            G  A     KDY              T WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAL Y++ QCLGAICG G+VKGF               ++ GY+KG GL AEIIGTFVLVYTVFSAT
Sbjct:    9 GPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQ-SAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSAT 193          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.731e-51
Identity = 110/186 (59.14%), Postives = 120/186 (64.52%), Query Frame = 3
Query:  156 GTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            G  A     KDY              T WS YRA IAEFIAT LFLYI+V TV+G            +  C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAL Y++ QCLGAICG G+VKGF               ++ GY+KG GL AEIIGTFVLVYTVFSAT
Sbjct:   10 GPEAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQ-SAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSAT 194          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 8.071e-51
Identity = 108/158 (68.35%), Postives = 117/158 (74.05%), Query Frame = 3
Query:  234 TSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            T WS YRA IAEF+AT LFLYI+VLTV+G  ++S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G VK F               +A GY  G GL AEIIGTFVLVYTVFSAT
Sbjct:   31 TKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSAT 187          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.054e-50
Identity = 107/158 (67.72%), Postives = 117/158 (74.05%), Query Frame = 3
Query:  234 TSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            T WS YRA IAEF+AT LFLY++VLTV+G  ++S+TK     C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAICG G VK F               +A GY  G GL AEIIGTFVLVYTVFSAT
Sbjct:   31 TKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSAT 187          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.377e-50
Identity = 108/177 (61.02%), Postives = 119/177 (67.23%), Query Frame = 3
Query:  183 KDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            KDY               SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAL Y+V QCLGAICG G+VK F               +A GY++G GLGAEIIGTFVLVYTVFSAT
Sbjct:   19 KDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSAT 194          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.798e-50
Identity = 106/179 (59.22%), Postives = 119/179 (66.48%), Query Frame = 3
Query:  183 KDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGV----------VKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            KDY               SWS YRA IAEFIAT LFLY++V TV+G             ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAL YMV QCLGA+CG G+VK F               +A GY++G GLGAEI+GTFVLVYTVFSAT
Sbjct:   19 KDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQ-SAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSAT 196          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.348e-50
Identity = 110/186 (59.14%), Postives = 121/186 (65.05%), Query Frame = 3
Query:  156 GTAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            G AA     KDY               SWS YRA IAEFIAT LFLYI+V TV+G           ++  C  VG+ GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK F               +A GY+KG GL AEIIGTFVLVYTVFSAT
Sbjct:   10 GGAAGEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQ-SAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSAT 194          
BLAST of FC931370 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.005e-50
Identity = 109/184 (59.24%), Postives = 124/184 (67.39%), Query Frame = 3
Query:  159 TAAQSQDGKDYVXXXXXXXXXXXXXTSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK-------CSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMXXXXXXXXXXXXXXVAHGYTKGDGLGAEIIGTFVLVYTVFSAT 689
            T  +S  GKDY+               WSFYRA IAEFIAT LFLY++VLTV+G  KS T        C++VG+ GI+WAFGGMIF LVYCTAGISGGHINPAVTFGLFLA K+SL RA+ YMV QCLGA CG G+VK F               ++ GY  G G+GAEIIGTFVLVYTVFSAT
Sbjct:    7 TEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGF-KSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQ-STYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSAT 188          
The following BLAST results are available for this feature:
BLAST of FC931370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PIP25_MAIZE4.279e-5259.78Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1[more]
PIP22_ORYSJ5.589e-5262.15Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP24_MAIZE4.731e-5159.14Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE4.731e-5159.14Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP22_ARATH8.071e-5168.35Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP23_ARATH1.054e-5067.72Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP21_MAIZE1.377e-5061.02Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_MAIZE1.798e-5059.22Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_ORYSJ2.348e-5059.14Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP26_ARATH4.005e-5059.24Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC34104D07EF PostHarvP1 Citrus clementina cDNA clone C34104D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931370 ID=FC931370; Name=FC931370; organism=Citrus clementina; type=EST; length=689bp
AGGGACTCCCGTAGCAAGATCAAACAGCTACACGCAGACGACTCAAATCT
TTTTTGTCTTTTAGCTAATTAAGTGAAGAAGAGCGAGCGAAAATGGAGGG
CAAAGAAGAGGGCGTTAGATTAGGAGCCAATAAGTTCACTGAGAGGCAAC
CGATTGGAACGGCAGCTCAGAGCCAAGATGGAAAGGACTACGTTGAGCCG
CCGCCGGCACCACTCTTCGAGGAAGAAGAGCTCACGTCTTGGTCGTTTTA
CAGGGCCGGTATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCT
CCGTATTGACAGTGATGGGCGTCGTCAAGTCCAACACCAAGTGCTCAACC
GTCGGCATTCAAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGCGCT
CGTTTACTGCACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGA
CATTCGGGCTGTTCTTGGCGAGGAAGCTGTCGTTGACACGTGCACTTTTC
TACATGGTGATGCAGTGTCTGGGAGCCATCTGTGGTGCTGGCGTTGTAAA
GGGTTTCATGGGTGCCGGCCAATACGGTCGGCTCGGCGGCGGTGCCAATG
CTGTAGCCCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATT
GGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACT
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