FC931402
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB3_XENLA (Voltage-gated potassium channel subunit beta-3 OS=Xenopus laevis GN=kcnab3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.488e-13 Identity = 66/221 (29.86%), Postives = 105/221 (47.51%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGA-VSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEA---GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G FG+ +S+ A + A+ G+N FDT+ Y +E+ LGK LK R+ Y+V+TK G+ S + + + SL RLQLDYVDI+ + ++ S + + + + Q A G R+ + + + +PP V ++ +E LP L K GVG ++ SPL GL Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWV---TFGSQISDEVAENLMTVAYEHGVNLFDTAEVYAAGRAERTLGKILKKKEWRRSSYVVTTKIYWGGQAETERGLSRKHIIEGLRGSLERLQLDYVDIVFANRMDPNSPMEEIVRAMTFVINQGMAMYWGTSRWSAMEIMEAYSVARQFNLIPP----VCEQAEYHLFQREKVETQLPELYHKIGVGSMTWSPLACGL 284
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.361e-13 Identity = 63/218 (28.90%), Postives = 100/218 (45.87%), Query Frame = 2 Query: 95 LGNTGLRLSCVGFGASPLGNVFGAVS-ENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCGRYVDGFDFSAE----------RVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSKGVGVISASPLCMG 715 LG+ GL +S G G + +G E D + + A GI DTS YG +E +LGKALK G R +++TK G V G + AE V + + SL RL +D +D+ H ++ +I T+ L+K E GK+++IG++ P AV + S + E+++P + G+G+++ SPL G Sbjct: 13 LGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALK--GGTRERVVLATKFG-IVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEI---TVGELKKLVEEGKLKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVE----EEIIPTCRELGIGIVAYSPLGRG 220
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: YI7E_SCHPO (Putative aryl-alcohol dehydrogenase C977.14c OS=Schizosaccharomyces pombe GN=SPAC977.14c PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.597e-12 Identity = 59/240 (24.58%), Postives = 107/240 (44.58%), Query Frame = 2 Query: 95 LGNTGLRLS-----CVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC----------------GRYVDGFD---------FSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYS--INDSTLEDLLPYLKSKGVGVISASPLCMGL 718 LGN+GL++S C+ +G + E + ++ A+ GI FDT+ Y +SE+++GK ++ +PR+ ++ +KC R V D S + + ++++S+ RL Y+D+LQ H + E + AL E+GK+R+IG + + F + + +S +Y + +++PY + GVG+I SPL GL Sbjct: 12 LGNSGLKVSKLILGCMSYGKKEYWEDWVLEDEEEVFKIMKAAYDAGIRTFDTANCYSAGVSEELVGKFIRKYEIPRSSIVILSKCFFPVRKDLIKIFGDLSSRGVHFLDSPELANQCGLSRKHIFDAVEDSVKRLGT-YIDVLQIHRYD---PHVSAEEVMRALNDVVESGKVRYIGASTMRCYQFIELQNTAEKHGWHKFISMQNYHNLLYREEEREMIPYCQKTGVGLIPWSPLARGL 247
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB_ORYSJ (Probable voltage-gated potassium channel subunit beta OS=Oryza sativa subsp. japonica GN=KOB1 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.085e-12 Identity = 60/225 (26.67%), Postives = 106/225 (47.11%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGA-SPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFT------YMLDRVPPGAVDVILSYCHYSI--NDSTLEDLLPYLKSKGVGVISASPLCMGL 718 ++ + LG +GLR+S + +GA GN + + R+A G+NFFD + Y +E+++G+A++ G R++ +VSTK G+ + S + + + SL RL +DYVD++ CH + V ET+ A+ + G + G + + T LD V P I+ Y++ + LP + G+G+ + SPL G+ Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDA---GVNFFDNAEVYANGRAEEIMGQAMRDLGWRRSDVVVSTKLFWGGQGPNDKGLSRKHIVEGLRGSLKRLDMDYVDVVYCHRPD---ATTPVEETVRAMNWVIDHGMAFYWGTSEWSAQQITEAWSVANRLDLVGP-----IVEQPEYNLFSRHKVESEFLPLYSTYGLGLTTWSPLASGV 214
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.724e-12 Identity = 63/227 (27.75%), Postives = 105/227 (46.26%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYG----GTLSEKMLGKALKAAGVPRNEYIVSTKCGRYV--------DGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLP-LEIFTYMLDRVPPGAVDVILSYCHYSINDSTLE-DLLPYLKSKGVGVISASPLCMGL 718 +E LG TGLR+S + G G E A + EA GI FFDT+ YG L+E ++GK G R + +++TK + D S ++ R ++ SL RLQ D++++ Q H I+ + +E A + Q +GK+ +IG + + + + ++ YS+ + T E ++LP + G+GV++ SPL GL Sbjct: 1 MEYTYLGRTGLRVSRLCLGTMNFGV---DTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRT---PWDEIWEAFETQVRSGKVDYIGSSNFAGWHLVKAQAEAEKRRFMGLVTEQHKYSLLERTAEMEVLPAARDLGLGVVAWSPLAGGL 221
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB3_RAT (Voltage-gated potassium channel subunit beta-3 OS=Rattus norvegicus GN=Kcnab3 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12 Identity = 63/221 (28.51%), Postives = 104/221 (47.06%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGA-VSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G FG+ +S+ A + A+ G+N FDT+ Y +E+ LG LK+ G R+ Y+++TK G+ S + + + SL RLQL+YVDI+ + + S +++IV + + G R+ + + +PP V ++ +E LP L K GVG ++ SPL L Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWV---TFGSQISDETAEDLLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLQGSLDRLQLEYVDIVFANRSDPSSPMEEIVRAMTYVINQGLALYWGTSRWSAAEIMEAYSMARQFNLIPP----VCEQAENHFFQREKVEMQLPELYHKIGVGSVTWSPLACSL 291
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.068e-12 Identity = 64/224 (28.57%), Postives = 102/224 (45.54%), Query Frame = 2 Query: 59 MAFPLRKLELRPLGNTGLRLSCVGFGASPLGNVFGAVS-ENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKCG-RYVDG---FDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSKGVGVISASPLCMG 715 MA L + LG+ GL +S G G + +G E++ + + A G+ F DTS YG +E +LGKAL+ G R + ++TK G + DG V + + S RL +D +D+ H I+ + TI L+K E GKI++IG++ P AV + S + ED++P + G+G+++ SPL G Sbjct: 1 MAAALVSVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQ--GGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRID---KRVPIEVTIGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLW----SRDAEEDIIPTCRELGIGIVAYSPLGRG 215
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB3_HUMAN (Voltage-gated potassium channel subunit beta-3 OS=Homo sapiens GN=KCNAB3 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11 Identity = 65/234 (27.78%), Postives = 103/234 (44.02%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGA-VSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYC----------------HYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G FG+ +S+ A + A+ G+N FDT+ Y +E+ LG LK+ G R+ Y+++TK G+ S + + + SL RLQL YVDI+ N + P ++ + ++ GL L T GA +++ +Y H+ +E LP L K GVG ++ PL GL Sbjct: 78 MKYRNLGKSGLRVSCLGLGTWV---TFGSQISDETAEDVLTVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSRKHIIEGLRGSLERLQLGYVDIV------------FANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRW-----GAAEIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGL 291
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB2_XENLA (Voltage-gated potassium channel subunit beta-2 OS=Xenopus laevis GN=kcnab2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.306e-11 Identity = 66/228 (28.95%), Postives = 108/228 (47.37%), Query Frame = 2 Query: 68 PLRKLEL-RPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGSLDQIVNETIPALQKQKEAGKIRFIGIT-GLPLEIF-TYMLDR----VPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 P R+L+ R LG +GLR+SC+G G G +++ A + A+ GIN FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQLDYVD++ + + + + ET+ A+ G + G + +EI Y + R +PP + ++ +E LP L K GVG ++ SPL G+ Sbjct: 32 PKRQLQFYRNLGKSGLRVSCLGLGTWVTFG--GQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPD---PNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPP----ICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGI 250
BLAST of FC931402 vs. ExPASy Swiss-Prot
Match: KCAB1_RAT (Voltage-gated potassium channel subunit beta-1 OS=Rattus norvegicus GN=Kcnab1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.011e-11 Identity = 58/220 (26.36%), Postives = 102/220 (46.36%), Query Frame = 2 Query: 80 LELRPLGNTGLRLSCVGFGASPLGNVFGAVSENDAVASVREAFRLGINFFDTSPYYGGTLSEKMLGKALKAAGVPRNEYIVSTKC---GRYVDGFDFSAERVTRSIDESLARLQLDYVDILQCHDIEFGS-LDQIVNETIPALQKQKEA--GKIRFIGITGLPLEIFTYMLDRVPPGAVDVILSYCHYSINDSTLEDLLPYLKSK-GVGVISASPLCMGL 718 ++ R LG +GLR+SC+G G G +S+ A + A+ G+N FDT+ Y +E +LG +K G R+ +++TK G+ S + + + SL RLQL+YVD++ + + + +++IV + + G R+ + + + +PP V ++ +E LP L K GVG ++ SPL G+ Sbjct: 71 MKYRNLGKSGLRVSCLGLGTWVTFG--GQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPP----VCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGI 284 The following BLAST results are available for this feature:
BLAST of FC931402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931402 ID=FC931402; Name=FC931402; organism=Citrus clementina; type=EST; length=720bpback to top |