FC931464

Overview
NameFC931464
Unique NameFC931464
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAHC_HORVU (Carbonic anhydrase, chloroplastic OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 90/154 (58.44%), Postives = 112/154 (72.73%), Query Frame = 2
Query:  233 VERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVXICSSAKSKVKKEMHDLSFEEQCXNCEK 694
            VER+KTGF +FKTE Y+K PD +  L  GQ+PK++VFAC+DSRVCPS  L  +PGEAF +RNIANMVP Y + KY+G G+AIEYAV  LKVE IVVIGHS CGGIK L+S+ D    +  F+E+WV I   AK KV+ E   + F++QC   EK
Sbjct:  127 VERLKTGFEKFKTEVYDKKPDFFEPLKAGQAPKYMVFACADSRVCPSVTLGLEPGEAFTIRNIANMVPAYCKNKYAGVGSAIEYAVCALKVEVIVVIGHSRCGGIKALLSLKDGADDSFHFVEDWVRIGFPAKKKVQTECASMPFDDQCTVLEK 280          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_SYNE7 (Carbonic anhydrase OS=Synechococcus elongatus (strain PCC 7942) GN=icfA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 46/111 (41.44%), Postives = 68/111 (61.26%), Query Frame = 2
Query:  233 VERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSI 565
            + ++  G   F+T  Y  + DL+   AKGQ P+ L   CSDSR+ P+ I     GE F++RN  N++PP+      G GA+IEYA+  L +E++VV GHS CG +KGL+ +
Sbjct:    1 MRKLIEGLRHFRTSYYPSHRDLFEQFAKGQHPRVLFITCSDSRIDPNLITQSGMGELFVIRNAGNLIPPFGAAN-GGEGASIEYAIAALNIEHVVVCGHSHCGAMKGLLKL 110          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_HELPJ (Carbonic anhydrase OS=Helicobacter pylori J99 GN=cynT PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.698e-19
Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  251 GFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYS-GAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA-SDFIEEWVXICSSAKSKVK 643
            G ++F+  +YE+  +LY +L   Q P  L  +C DSRV P+ I   QPGE +++RN+ N++PP    K S    A++EYA+ H+ V+N+++ GHS CG    +  I D  T A + +I  W+      K ++K
Sbjct:    6 GALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELK 138          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_SYNY3 (Carbonic anhydrase OS=Synechocystis sp. (strain PCC 6803) GN=icfA PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.452e-19
Identity = 44/111 (39.64%), Postives = 70/111 (63.06%), Query Frame = 2
Query:  233 VERMKTGFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSI 565
            ++R+  G  +F+   +  + DL+  L+ GQ P+ L   CSDSRV P+ I   + G+ F++RN  N++PPY      G GAA+EYA++ L++  I+V GHS CG +KGL+ +
Sbjct:    1 MQRLIEGLQKFREGYFSSHRDLFEQLSHGQHPRILFICCSDSRVDPNLITQSEVGDLFVIRNAGNIIPPYGAAN-GGEGAAMEYALVALEINQIIVCGHSHCGAMKGLLKL 110          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_ECOLI (Carbonic anhydrase 1 OS=Escherichia coli (strain K12) GN=cynT PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  251 GFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMS 562
            GF++F+ E + K   L+  LA  QSP+ L  +CSDSR+ P  +   +PG+ F++RN  N+VP Y  +   G  A++EYAV  L+V +IV+ GHS CG +  + S
Sbjct:    7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEP-GGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS 109          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_ECO57 (Carbonic anhydrase 1 OS=Escherichia coli O157:H7 GN=cynT PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 2
Query:  251 GFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMS 562
            GF++F+ E + K   L+  LA  QSP+ L  +CSDSR+ P  +   +PG+ F++RN  N+VP Y  +   G  A++EYAV  L+V +IV+ GHS CG +  + S
Sbjct:    7 GFLKFQREAFPKREALFKQLATQQSPRTLFISCSDSRLVPELVTQREPGDLFVIRNAGNIVPSYGPEP-GGVSASVEYAVAALRVSDIVICGHSNCGAMTAIAS 109          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_PSEAE (Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cynT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 2
Query:  251 GFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMS 562
            GF++F+ + Y     L+ +LA  Q+PK L  ACSDSRV P  +   +PGE F++RN  N+VP Y  +   G  A++EYAV  L V +IVV GHS CG +  + S
Sbjct:    7 GFLRFQRDAYPARSQLFKSLATRQAPKALFIACSDSRVVPELLTQREPGELFVIRNAGNIVPGYGPQP-GGVSASVEYAVAVLGVGDIVVCGHSDCGAMGAIAS 109          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CYNT_HELPY (Carbonic anhydrase OS=Helicobacter pylori GN=cynT PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.589e-17
Identity = 47/133 (35.34%), Postives = 75/133 (56.39%), Query Frame = 2
Query:  251 GFIQFKTEKYEKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYS-GAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTA-SDFIEEWVXICSSAKSKVK 643
            G ++F+  +YE+  +LY +L   Q P  L  +C DSRV P+ I   +PGE +++ N+ N+ PP    K S    A+IEYA+ H+ V+N+++ GHS CG    +  I D  T A + +I  W+      K ++K
Sbjct:    6 GALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELK 138          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAN_EMENI (Carbonic anhydrase OS=Emericella nidulans GN=AN1805 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.030e-16
Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 2
Query:  287 NPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNG 577
            +P+ +  LA GQSP++L   CSDSRV  + I+    GE F+ RNIAN+VP  D    S     I YAV HLKV++IVV GH  CGG++  ++  D G
Sbjct:   36 DPEFFNKLAAGQSPEYLYIGCSDSRVPANEIMGLDAGEVFVHRNIANVVPTIDLSSMS----VINYAVGHLKVKHIVVCGHYNCGGVQAALTPTDLG 128          
BLAST of FC931464 vs. ExPASy Swiss-Prot
Match: CAN_SHIFL (Carbonic anhydrase 2 OS=Shigella flexneri GN=can PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.392e-13
Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 2
Query:  281 EKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPGEAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNG 577
            E++P  +  LA+ Q P+FL   CSDSRV    +   +PGE F+ RN+AN+V   D    S     ++YAV  L+VE+I++ GH  CGG++  +  P+ G
Sbjct:   20 EEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLS----VVQYAVDVLEVEHIIICGHYGCGGVQAAVENPELG 114          
The following BLAST results are available for this feature:
BLAST of FC931464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAHC_HORVU1.629e-4658.44Carbonic anhydrase, chloroplastic OS=Hordeum vulga... [more]
CYNT_SYNE75.836e-2041.44Carbonic anhydrase OS=Synechococcus elongatus (str... [more]
CYNT_HELPJ1.698e-1936.09Carbonic anhydrase OS=Helicobacter pylori J99 GN=c... [more]
CYNT_SYNY36.452e-1939.64Carbonic anhydrase OS=Synechocystis sp. (strain PC... [more]
CYNT_ECOLI1.217e-1741.35Carbonic anhydrase 1 OS=Escherichia coli (strain K... [more]
CYNT_ECO571.217e-1741.35Carbonic anhydrase 1 OS=Escherichia coli O157:H7 G... [more]
CYNT_PSEAE1.589e-1744.23Carbonic anhydrase OS=Pseudomonas aeruginosa GN=cy... [more]
CYNT_HELPY1.589e-1735.34Carbonic anhydrase OS=Helicobacter pylori GN=cynT ... [more]
CAN_EMENI1.030e-1646.39Carbonic anhydrase OS=Emericella nidulans GN=AN180... [more]
CAN_SHIFL1.392e-1339.39Carbonic anhydrase 2 OS=Shigella flexneri GN=can P... [more]

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Properties
Property NameValue
Genbank descriptionC34105D07EF PostHarvP1 Citrus clementina cDNA clone C34105D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931464 ID=FC931464; Name=FC931464; organism=Citrus clementina; type=EST; length=702bp
GAACTCTTCAATACTGGTCCGAGATCGTGAAAAGAAGCGAGCAAGTTGAA
GTCGGCAGAATCCCGGAGAAATTGAAAAGAGAGAAGACATGGCAAACGAC
GCGTACGAGGATGCCATTGCAGGACTGACCAAGCTCCTCAGCGAGAAAAG
CGACCTCGAAGGAGTCGCCGCTGCGAAAATCAAGCAGATAACGGCCGATT
TAGAAGCGGCCGGTTCGAGGGACATTGACCCGGTGGAGAGGATGAAAACC
GGGTTCATTCAATTTAAGACAGAGAAATACGAGAAGAATCCTGATTTGTA
CGGTGCACTGGCCAAAGGCCAAAGCCCCAAGTTTCTGGTATTTGCATGCT
CAGACTCTCGAGTATGTCCATCCCATATCCTCAATTTTCAACCAGGAGAG
GCGTTTATGGTTCGAAACATTGCCAATATGGTCCCTCCATATGACCAGAA
AAAATACTCTGGAGCAGGTGCAGCCATTGAATATGCGGTGCTACATCTGA
AGGTGGAGAATATTGTAGTCATTGGACACAGTTGCTGTGGTGGTATAAAG
GGGCTCATGTCTATCCCTGATAATGGGACCACTGCGAGTGATTTCATAGA
AGAGTGGGTCNAAATCTGTTCATCTGCCAAGTCCAAGGTGAAAAAAGAAA
TGCATGATTTGAGTTTTGAGGAGCAATGCNAGAACTGTGAAAAGAGGCTG
TG
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