FC931475

Overview
NameFC931475
Unique NameFC931475
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_EMENI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Emericella nidulans GN=tpc1 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.031e-27
Identity = 72/183 (39.34%), Postives = 103/183 (56.28%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ--GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q+  + S    + HI+ P  Y G     K I REEGL G W+GN+PA L+ + Y  IQFT     +T     ++ + H       S++SGAL G  AT  +YP DLLRT  A+Q  G+ +VY ++ ++  DI  T G  G + G S  + +I+PY GL F TY+  +
Sbjct:   29 RFCIAPLDVVKIRLQLQIH-SLSDPTSHAHITGPV-YKGTLSTIKTILREEGLTGLWKGNIPAELLYVCYGGIQFTT---YRTTTQLLAQLDPHRLPQPIESFISGALGGGIATAATYPLDLLRTRFAAQGSGDNRVYESLFASLRDIAKTEGTVGFFRGCSAAVGQIVPYMGLFFATYEALR 206          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_PHANO (Mitochondrial thiamine pyrophosphate carrier 1 OS=Phaeosphaeria nodorum GN=TPC1 PE=3 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 70/184 (38.04%), Postives = 104/184 (56.52%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQ---LEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R V +PLDVIKIR Q+Q   L   TS+  LNG +     Y G     K I R+EG+ G W+GN+PA L+ + Y ++QF+    +       +    +   S+  S++SGA AG AAT  +YP DLLRT  A+QG+ +VY ++ ++   I    G  G + GL   + +I+PY GL F +Y++ K
Sbjct:   29 RFVIAPLDVIKIRLQLQIHSLSEPTSYRGLNGPV-----YKGTLGTLKQILRDEGVTGLWKGNIPAELLYLTYGSVQFSAYTNISQML--DTIPAPYTLPSSANSFISGAGAGAAATTVTYPLDLLRTRFAAQGKDRVYTSIVASLKSIAQHEGPTGFFRGLGAGVSQIVPYMGLFFASYESLK 205          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_AJECN (Mitochondrial thiamine pyrophosphate carrier 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TPC1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q+  + S  L +  I  P  Y G     K IFR+EG+ G W+GN+PA L+ + Y  IQF+    + +    + +   H       S++SGA+AG  AT  +YP DLLRT  A+QG  ++Y ++R +  DI  T G  G + G +  + +I+PY GL F  Y+  +
Sbjct:   29 RFCVAPLDVVKIRLQLQIH-SLSDPLSHRDIKGPI-YKGTISTLKSIFRDEGITGLWKGNIPAELLYICYGGIQFSSYRAISS----ALRTLPHPLPQPVESFISGAVAGGIATTSTYPLDLLRTRFAAQGNDRIYASLRVSVRDIARTEGPHGFFRGATAAIAQIVPYMGLFFAGYEALR 203          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_ASPFU (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus fumigatus GN=tpc1 PE=3 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.121e-26
Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q+   +  A  + H      Y G     + I ++EG+ G W+GN+PA LM + Y A+QFT         A   + + H    A  S+VSGA+AG  AT  +YP DLLRT  A+QG  ++Y ++ ++  DI  + G  G + G S  + +I+PY GL F TY++ +
Sbjct:   29 RFCVAPLDVVKIRLQLQIHSLSDPA--SHHDVVGPIYKGTLSTMRTIIKQEGITGLWKGNIPAELMYVCYGALQFTAYRTTTQILA---QLDPHRLPPALESFVSGAVAGGLATASTYPLDLLRTRFAAQGTERIYTSLLASVRDIARSEGPAGFFRGCSAAVGQIVPYMGLFFATYESLR 204          

HSP 2 Score: 70.8626 bits (172), Expect = 7.798e-12
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 3
Query:   93 TSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKV---------YPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYD 617
            T PLD+++ RF  Q                   YT +  + +DI R EG  GF+RG   A+  ++PY  + F     L+   +G          +A     +G +A   A  G +P DL+R  L  QG  +          Y  + S    IV T+G RGLY GL+ +L++  P + +   TY+
Sbjct:  140 TYPLDLLRTRFAAQ--------------GTERIYTSLLASVRDIARSEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPVLSGLENMPFGSGDAA-----AGVIASVLAKSGVFPLDLVRKRLQVQGPTRTLYVHRNIPEYRGVFSTIAMIVRTQGVRGLYRGLTVSLIKAAPASAITMWTYE 304          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_ASPOR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus oryzae GN=tpc1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26
Identity = 70/184 (38.04%), Postives = 101/184 (54.89%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQ---LEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q   L   TS   + G +     Y G     + I REEG+ G W+GN+PA LM + Y AIQF      +T     S+ + +       S+V+GA AG  AT  +YP DLLRT  A+QG  +VY ++ ++  DI    G +G + G S  + +I+PY GL F TY++ +
Sbjct:   29 RFCVAPLDVVKIRLQLQIHSLSDPTSHQNIKGPV-----YKGTLPTIRSIVREEGITGLWKGNIPAELMYVCYGAIQFAAY---RTTTQALSQLDPYRLPPPAESFVAGATAGGLATASTYPLDLLRTRFAAQGTERVYTSLYASVRDIAQNEGPKGFFRGCSAAVGQIVPYMGLFFATYESLR 204          

HSP 2 Score: 67.781 bits (164), Expect = 6.601e-11
Identity = 50/184 (27.17%), Postives = 80/184 (43.48%), Query Frame = 3
Query:   93 TSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPK---------VYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYD 617
            T PLD+++ RF  Q                   YT ++ + +DI + EG  GF+RG   A+  ++PY  + F     L+   +G          +A     +G +A   A  G +P DL+R  L  QG  +          Y  + +    IV T+G RGLY GL+ +L +  P + +   TY+
Sbjct:  140 TYPLDLLRTRFAAQ--------------GTERVYTSLYASVRDIAQNEGPKGFFRGCSAAVGQIVPYMGLFFATYESLRPVMSGLHDLPFGSGDAA-----AGVVASVLAKTGVFPLDLVRKRLQVQGPTRSKYVHRNIPEYQGVYNTMAMIVRTQGMRGLYRGLTVSLFKAAPASAVTMWTYE 304          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_NEOFI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.497e-26
Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q+   +  A     +     Y G     + I ++EG+ G W+GN+PA LM + Y A+QFT     +T     ++ + H    A  S+VSGA+AG  AT  +YP DLLRT  A+QG  ++Y ++ ++  DI    G  G + G S  + +I+PY GL F TY++ +
Sbjct:   29 RFCVAPLDVVKIRLQLQIHSLSDPASHRDVVG--PIYKGTLSTMRAIIKQEGITGLWKGNIPAELMYVCYGALQFTAY---RTTTQVLAQLDPHRLPPALESFVSGAVAGGLATASTYPLDLLRTRFAAQGTERIYTSLLASVQDIARNEGPAGFFRGCSAAVGQIVPYMGLFFATYESLR 204          

HSP 2 Score: 71.2478 bits (173), Expect = 5.970e-12
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 3
Query:   93 TSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKV---------YPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYD 617
            T PLD+++ RF  Q                   YT +  + +DI R EG  GF+RG   A+  ++PY  + F     L+   +G          +A     +G +A   A  G +P DL+R  L  QG  +          Y  + S    IV T+G RGLY GL+ +L++  P + +   TY+
Sbjct:  140 TYPLDLLRTRFAAQ--------------GTERIYTSLLASVQDIARNEGPAGFFRGCSAAVGQIVPYMGLFFATYESLRPVLSGLENMPFGSGDAA-----AGVIASVLAKTGVFPLDLVRKRLQVQGPTRTLYVHRNIPEYRGVFSTIAMIVRTQGVRGLYRGLTVSLIKAAPASAITMWTYE 304          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_MAGGR (Mitochondrial thiamine pyrophosphate carrier 1 OS=Magnaporthe grisea GN=TPC1 PE=3 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.618e-25
Identity = 64/184 (34.78%), Postives = 99/184 (53.80%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSK-YTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQ--GEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R V +PLDV+KIR Q+Q    +        + R    Y G     + I R+EG+ G W+GNVPA L+ + YSA+QF             +  +  +  +A  S+V+GA AG  +T  +YP DLLRT  A+Q  G+ +VY ++R A  DI    G+RG + G+ P + +  P+ G+ F  Y++ +
Sbjct:   30 RFVIAPLDVVKIRLQLQTHSLSDPLSQRAELLRGGPVYKGTLSTMRHIARQEGITGLWKGNVPAELLYITYSAVQFATYRSAAQLLHRVAGEDRQLPAAAE-SFVAGAAAGVTSTTVTYPLDLLRTRFAAQGSGDDRVYQSLRRAVADIWRDEGYRGFFRGIGPAVGQTFPFMGIFFAAYESLR 212          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_ASPTN (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25
Identity = 69/181 (38.12%), Postives = 101/181 (55.80%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q+  + S    + ++S P  Y G     + I REEG+ G W+GN+PA LM + Y  +QFT  ++  T A        H       S+V+GA AG  AT  +YP DLLRT  A+QG  +VY ++ ++  DI    G  G + G S  + +I+PY GL F TY++ +
Sbjct:   29 RFCVAPLDVVKIRLQLQIH-SLSDPSSHRNVSGPI-YKGTISTMRAIIREEGITGLWKGNIPAELMYVCYGGVQFTT-YRTTTQALAQLP---HRLPQPVESFVAGASAGGLATAATYPLDLLRTRFAAQGTERVYTSLLASVRDIARIEGPAGFFRGCSAAVGQIVPYMGLFFATYESLR 203          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_YARLI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Yarrowia lipolytica GN=TPC1 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.049e-24
Identity = 67/186 (36.02%), Postives = 98/186 (52.69%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKL-KTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQG----EPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYDTFK 626
            R   +PLDV+KIR Q+Q + +               Y G+FQ  + I R+EG+   W+GN+PA L+ + Y A QF   H + +   A +  AE     S   S+++GA AG  AT+ +YPFDL RT+ A+QG      K Y ++   F  I  T G  G + G+S +++ I PY GL F +Y   K
Sbjct:   28 RFCIAPLDVVKIRLQLQKDGSRY-------------YRGIFQTMQQIVRDEGVTALWKGNIPAELLYVFYGATQFVTYHHVNQVINAYNETAEKWKISSGAQSFIAGATAGAGATIATYPFDLFRTLFAAQGAKNCNVKNYTSLFQTFKLIYKTEGPLGFFRGVSSSIISIAPYMGLFFASYGRVK 200          
BLAST of FC931475 vs. ExPASy Swiss-Prot
Match: TPC1_PICST (Mitochondrial thiamine pyrophosphate carrier 1 OS=Pichia stipitis GN=TPC1 PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.282e-22
Identity = 67/178 (37.64%), Postives = 95/178 (53.37%), Query Frame = 3
Query:   84 RTVTSPLDVIKIRFQVQLEPTTSWALLNGHISRPSKYTGMFQATKDIFREEGLWGFWRGNVPALLMVMPYSAIQFTVLHKLKTFAAGSSKAENHINLSAYLSYVSGALAGCAATVGSYPFDLLRTILASQGEPKVYPTMRSAFVDIVSTRGFRGLYAGLSPTLVEIIPYAGLQFGTYD 617
            R VT+PLD IKIR Q+Q          +   SR S  T      KD+ + EG    W+GNVPA ++ + Y A QFT    +  + +  S        S+  S VSG  AG  +T+ +YPFDLLRT LA+  E K+  +M     +I+S+ GF GL+AG+ P ++ I    GL F +Y+
Sbjct:   33 RAVTAPLDTIKIRLQLQR---------SAFRSRVSVTT----VVKDLLKNEGAIALWKGNVPAEILYVLYGAAQFTTYSSISRWLSHLSDTSGFNLPSSAHSLVSGTGAGVVSTLVTYPFDLLRTRLAANSEKKLL-SMSGTAREIISSEGFTGLFAGIKPAMLSISTTTGLMFWSYE 196          
The following BLAST results are available for this feature:
BLAST of FC931475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
TPC1_EMENI5.031e-2739.34Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_PHANO8.581e-2738.04Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_AJECN8.581e-2737.02Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_ASPFU1.121e-2637.02Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_ASPOR1.464e-2638.04Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_NEOFI2.497e-2636.46Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_MAGGR1.618e-2534.78Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_ASPTN3.605e-2538.12Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_YARLI1.049e-2436.02Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
TPC1_PICST1.282e-2237.64Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]

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Properties
Property NameValue
Genbank descriptionC34105E06EF PostHarvP1 Citrus clementina cDNA clone C34105E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931475 ID=FC931475; Name=FC931475; organism=Citrus clementina; type=EST; length=713bp
GGTTGATGGAGGAGCAGGAGCCGGGGCAATGGAAACGAATGGTGATCGAT
GCGTCTGCAGGCGCGATTGCCGGTGGAATCTCACGTACTGTAACTTCGCC
TCTTGATGTTATTAAGATCCGTTTCCAGGTTCAATTGGAGCCCACGACTT
CATGGGCGTTGCTAAATGGACATATATCCAGGCCATCAAAATATACTGGC
ATGTTCCAAGCAACGAAGGATATATTTAGAGAGGAAGGTTTATGGGGTTT
CTGGCGTGGCAATGTGCCAGCCTTACTTATGGTTATGCCATACAGTGCCA
TACAATTTACAGTGTTACACAAATTGAAAACATTCGCTGCTGGTTCTTCC
AAGGCAGAAAATCATATTAATTTAAGCGCTTACTTGTCTTATGTCAGTGG
GGCATTAGCTGGGTGTGCAGCTACTGTTGGATCATATCCATTTGATCTTT
TACGAACCATATTAGCGTCACAAGGAGAACCTAAGGTGTATCCCACAATG
AGGTCTGCATTTGTTGATATTGTCAGCACCCGAGGCTTTAGAGGACTGTA
TGCTGGGCTGTCACCTACACTGGTTGAGATTATTCCTTATGCTGGCCTGC
AATTCGGCACATATGATACATTCAAGCGCTGGACCATGGACTGGAACCGG
ATAAGATCTTCTAATACAAGCTCAACTGGTGCAGACATAATCTTTCAGTT
TTCAGCTTTTGTC
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