FC931478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_BLEAM (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma americanum GN=eRF1 PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 3.735e-56 Identity = 101/177 (57.06%), Postives = 133/177 (75.14%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYN-KVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKLYN ++P NGL+LY G ++ ++G EKK TIDF+P+R IN +LY+CDNKFHT L +LL DDKFGFI++DGNGTLFGTL GNT+EVLHKFSVDLP+ Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGTLFGTLQGNTKEVLHKFSVDLPK 178 HSP 2 Score: 29.6462 bits (65), Expect = 3.735e-56 Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKH RGGQSALRFA Sbjct: 178 KKHRRGGQSALRFA 191
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_BLEMU (Eukaryotic peptide chain release factor subunit 1 OS=Blepharisma musculus GN=eRF1 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.406e-55 Identity = 101/177 (57.06%), Postives = 132/177 (74.58%), Query Frame = 2 Query: 137 DGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYN-KVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +G E +N RGNGTS+ISLI+PPR+Q+ + KM+ +E+G +SNIKSR+ RQ+V A+TS ++RLKLYN ++P NGL+LY G ++ ++G EKK TIDF+P+R IN +LY+CDNKFHT L +LL DDKFGFI++DGNG LFGTL GNTREVLHKFSVDLP+ Sbjct: 2 EGDELTQNIEQWKIKRLIDNLDKARGNGTSLISLIIPPREQLPIINKMITEEYGKSSNIKSRIVRQAVQSALTSTKERLKLYNNRLPANGLILYCGEVINEEGVCEKKYTIDFQPYRAINTTLYICDNKFHTQPLKDLLVMDDKFGFIIIDGNGALFGTLQGNTREVLHKFSVDLPK 178 HSP 2 Score: 28.4906 bits (62), Expect = 1.406e-55 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKH RGGQSALRF+ Sbjct: 178 KKHRRGGQSALRFS 191
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_TETTH (Eukaryotic peptide chain release factor subunit 1 OS=Tetrahymena thermophila GN=ERF1 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 4.803e-53 Identity = 92/151 (60.93%), Postives = 118/151 (78.15%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 RG+GTSM+SLI+PP+ Q++ TK++ DEF A+NIK RVNRQSV A+ SA QRLKLY + P NGL+LY G ++ ++GKE K+ IDFEP++PIN SLY CD+KFH D L LLE+D FGFIVMDG G L+ L GNT+ VL+KFSV+LP+ Sbjct: 27 RGSGTSMVSLIIPPKKQINDSTKLISDEFSKATNIKDRVNRQSVQDAMVSALQRLKLYQRTPNNGLILYCGKVLNEEGKEIKLLIDFEPYKPINTSLYFCDSKFHVDELGSLLETDPPFGFIVMDGQGALYANLQGNTKTVLNKFSVELPK 177 HSP 2 Score: 30.4166 bits (67), Expect = 4.803e-53 Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQS++RFA Sbjct: 177 KKHGRGGQSSVRFA 190
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_DIDNA (Eukaryotic peptide chain release factor subunit 1 OS=Didinium nasutum GN=eRF1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 5.671e-51 Identity = 90/151 (59.60%), Postives = 120/151 (79.47%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +G+GTSMI+LI+ +DQ++ +ML +E G ASNIKSRV RQ+V A+TS ++LKLYNK PPNGLV++ G + +DG EK + ID EPF+PIN +LY CD+ FHT+ + +LLE +DKFGFI+MDGNG+LFGTL G+TR VL KF+VDLP+ Sbjct: 30 KGSGTSMITLIINFKDQINIHARMLAEEVGKASNIKSRVTRQNVTDALTSTLEKLKLYNKTPPNGLVIFCGLVQQEDGGEKMIKIDLEPFKPINTTLYKCDSVFHTEEVRKLLEDNDKFGFIIMDGNGSLFGTLQGSTRTVLLKFNVDLPK 180 HSP 2 Score: 30.0314 bits (66), Expect = 5.671e-51 Identity = 13/14 (92.86%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQSA RFA Sbjct: 180 KKHGRGGQSANRFA 193
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_TRYBB (Eukaryotic peptide chain release factor subunit 1 OS=Trypanosoma brucei brucei GN=ERF1 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.624e-50 Identity = 87/151 (57.62%), Postives = 121/151 (80.13%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 RG GTS+IS+ M P++Q+S + L +E+GTASNIKS N+ SV AIT++ RLK YN++PPNGL+LY GT++T + KEKK+T+D EPF+P++ SLYLCDNKFHT+ L+ +LESD+KFGFIV+DG+GT + TL G+ +E L F+V+LP+ Sbjct: 29 RGMGTSVISIYMTPKEQISGMVTKLNNEYGTASNIKSHTNKLSVQSAITASLGRLKQYNRLPPNGLLLYCGTVLTAENKEKKLTLDIEPFKPVSRSLYLCDNKFHTEELHRMLESDEKFGFIVVDGSGTTYATLCGSVKEKLSSFTVELPK 179 HSP 2 Score: 28.1054 bits (61), Expect = 3.624e-50 Identity = 12/14 (85.71%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQS RFA Sbjct: 179 KKHGRGGQSKNRFA 192
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_GIALA (Eukaryotic peptide chain release factor subunit 1 OS=Giardia lamblia GN=ERF1 PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 4.723e-50 Identity = 91/150 (60.67%), Postives = 118/150 (78.67%), Query Frame = 2 Query: 212 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 G+GTS+ISL++PP +Q+S VT ML +E+GTASNIKSRVN+ +VL AITSA RLKLYN++PPNGL +Y G I +DGK KV ID+ P++PI+ +YLCD+KFHT+ L ELL +DD FGFI+MDG TL TLSG R +L + +VDLP+ Sbjct: 35 GSGTSVISLLIPPGEQLSSVTGMLTNEYGTASNIKSRVNKNAVLSAITSAMSRLKLYNRLPPNGLAVYCGEI-EEDGKNTKVVIDYTPYKPISNFIYLCDSKFHTEHLRELLTNDDTFGFIIMDGKETLMATLSGTVRTILDRSTVDLPK 183 HSP 2 Score: 30.4166 bits (67), Expect = 4.723e-50 Identity = 12/14 (85.71%), Postives = 14/14 (100.00%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQS++RFA Sbjct: 183 KKHGRGGQSSVRFA 196
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_OXYTR (Eukaryotic peptide chain release factor subunit 1 OS=Oxytricha trifallax GN=ERF1 PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 5.568e-48 Identity = 87/152 (57.24%), Postives = 113/152 (74.34%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +GNGTSM+SLI+PP+D +++ K+L E A NIKSR+ +QSV+ AITS +++LKLY + P NGL LY G I +DGK EKK+ DFEPFRPIN LY C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L K +V+LP+ Sbjct: 32 KGNGTSMVSLIIPPKDDINKYGKLLTGEMSAAQNIKSRITKQSVVTAITSTKEKLKLYKQTPTNGLCLYCGVIYMEDGKTEKKINFDFEPFRPINQFLYFCGGKFQTEPLLSLLADDDKFGFIIVDGNGALYATLQGNSREILQKITVELPK 183 HSP 2 Score: 26.1794 bits (56), Expect = 5.568e-48 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKH +GGQS++RFA Sbjct: 183 KKHRKGGQSSVRFA 196
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_STYMT (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia mytilus GN=ERF1 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 9.459e-48 Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G I+ +DGK EKK+ DFEPFRPIN +Y C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L K +V+LP+ Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREILQKITVELPK 183 HSP 2 Score: 26.1794 bits (56), Expect = 9.459e-48 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKH +GGQS++RFA Sbjct: 183 KKHRKGGQSSVRFA 196
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_STYLE (Eukaryotic peptide chain release factor subunit 1 OS=Stylonychia lemnae GN=ERF1 PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 9.459e-48 Identity = 85/152 (55.92%), Postives = 114/152 (75.00%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +GNGTSM+SLI+PP++ +++ K+L E A NIKSR+ RQSV+ AITS +++LKLY + P NGL +Y G I+ +DGK EKK+ DFEPFRPIN +Y C KF T+ L LL DDKFGFI++DGNG L+ TL GN+RE+L K +V+LP+ Sbjct: 32 KGNGTSMVSLIIPPKEDINKSGKLLVGELSAAQNIKSRITRQSVITAITSTKEKLKLYRQTPTNGLCIYCGVILMEDGKTEKKINFDFEPFRPINQFMYFCGGKFQTEPLTTLLADDDKFGFIIVDGNGALYATLQGNSREILQKITVELPK 183 HSP 2 Score: 26.1794 bits (56), Expect = 9.459e-48 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKH +GGQS++RFA Sbjct: 183 KKHRKGGQSSVRFA 196
BLAST of FC931478 vs. ExPASy Swiss-Prot
Match: ERF1_DILMA (Eukaryotic peptide chain release factor subunit 1 OS=Dileptus margaritifer GN=eRF1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 9.461e-48 Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 2 Query: 209 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTDALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPR 661 +G+GTSMISLI+ +DQ++ KML DE G ASNIKSRV RQ+V A+TS ++LKLYNK P NGL++Y G D EK ID EPF+PIN SLY CD+ FHT+ + +LLE +D+FGF++MDGNG+LFG++ G TR V+ KF VDLP+ Sbjct: 30 KGSGTSMISLIINYKDQINPFMKMLVDEVGKASNIKSRVTRQNVTDALTSTMEKLKLYNKTPNNGLIIYCGLASEGDSGEKMFKIDMEPFKPINTSLYRCDSVFHTEEVKKLLEDNDRFGFLIMDGNGSLFGSVQGATRTVIQKFLVDLPK 180 HSP 2 Score: 28.8758 bits (63), Expect = 9.461e-48 Identity = 12/14 (85.71%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 658 KKHGRGGQSALRFA 699 KKHGRGGQS+ RFA Sbjct: 180 KKHGRGGQSSNRFA 193 The following BLAST results are available for this feature:
BLAST of FC931478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931478 ID=FC931478; Name=FC931478; organism=Citrus clementina; type=EST; length=700bpback to top |