FC931486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_PICTO (50S ribosomal protein L2P OS=Picrophilus torridus GN=rpl2p PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 76/211 (36.02%), Postives = 108/211 (51.18%), Query Frame = 3 Query: 81 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 MG+ I AQR+G GS V++S +H G ++ R+G K + +II PGR P+ + +K IA G Y Q ++ G + +G+V + +IP+G+ V N+E GD G RA+G A++ISH +KLPSG K CRA +G +AG G + P+LKAG + K VRGVAMN V HP Sbjct: 1 MGKHIVAQRRGHGSLVYRSPSHRHLGDIKY------PRDGTYK--IEDIIQAPGRNTPVLLIR-----NEKNEKNYMIAFNGAYVNQEIHVGDIDSPAIGDVTYLANIPDGSYVYNIESIPGDGGKFCRAAGTAALVISHGA---YVSLKLPSGVNKEFHPRCRATVGFIAGSGARDIPILKAGTHIKYLQSKAKRPYTVRGVAMNAVNHP 195
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BORRA (50S ribosomal protein L2 OS=Borrelia recurrentis (strain A1) GN=rplB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 76/212 (35.85%), Postives = 116/212 (54.72%), Query Frame = 3 Query: 84 GRVIRAQRKGAG--SVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 G+V RA R +G SV + H++ ++R +DF R+ + + VA I +DP R +A + +R K IA +G+ G + G A + +GN LP+ +IP G +V N+E ++G G L R +G YA+II+ D D VKLPSG ++I C A +G+V + KAG + ++ +R PKVRGVAMNP++HP Sbjct: 37 GKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDG-----DKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKS--RWLGRR---PKVRGVAMNPIDHP 233
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BORDL (50S ribosomal protein L2 OS=Borrelia duttonii (strain Ly) GN=rplB PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.053e-24 Identity = 76/212 (35.85%), Postives = 116/212 (54.72%), Query Frame = 3 Query: 84 GRVIRAQRKGAG--SVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 G+V RA R +G SV + H++ ++R +DF R+ + + VA I +DP R +A + +R K IA +G+ G + G A + +GN LP+ +IP G +V N+E ++G G L R +G YA+II+ D D VKLPSG ++I C A +G+V + KAG + ++ +R PKVRGVAMNP++HP Sbjct: 37 GKVSRAGRDSSGRISVRRRGGGHKR---RYREIDFARRDKFGIPARVAAIEYDPNRSPNIALLVYRDG-----DKRYIIAPKGVKVGDILESGPNAPIKIGNALPLENIPVGKMVHNIELNIGKGGQLVRGAGGYAMIIA--SDGDYVTVKLPSGEMRMIFKKCIATLGEVGNEDYMNVSIGKAGKS--RWLGRR---PKVRGVAMNPIDHP 233
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_THEAC (50S ribosomal protein L2P OS=Thermoplasma acidophilum GN=rpl2p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.065e-24 Identity = 75/211 (35.55%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 81 MGRVIRAQRKGAGS-VFKSHTHHRKGPAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 MG+ I QR+G GS V++S +H + + +D G V+ +IIH PGR APL + +K IA G + GQ + G ++ G + +IP+G+ V N+E GD G R++G +A+++SH +KLPSG + CRA +G VA G + P+LKAG H R K VRGVAMN V HP Sbjct: 1 MGKHIIPQRRGHGSLVYRSPSHRHI--TEVKHVDQGTY------VIKDIIHAPGRNAPLLELMGSDG-----KKAYQIAFTGAFVGQNIVAGNVDSVSPGTTTVLANIPDGSYVYNIESSPGDGGEFCRSAGTFALVVSHGQH---VTLKLPSGRMRDFDPRCRATLGVVAASGIKDPPILKAGTHVHYLRSKAKRPYTVRGVAMNAVNHP 195
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_DESAP (50S ribosomal protein L2 OS=Desulforudis audaxviator (strain MP104C) GN=rplB PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23 Identity = 72/211 (34.12%), Postives = 106/211 (50.24%), Query Frame = 3 Query: 90 VIRAQRKGAGSVFKSHT--HHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 ++ RK AG F+ HR G + +R +DF + G VA I +DP R A +A V + +K +A G+ GQ + G +A + VGN LP+R+IP G ++ N+E + G + R++G A +++ + D V+LPSG ++ P CRA IGQV + KAG A P VRGV MNPV+HP Sbjct: 33 LVEPLRKKAGRNFQGRVTVRHRGGGHKRLYRVIDFKRNKDGVPGKVATIEYDPNRSANIALVNYADG-----EKRYIVAPAGLKVGQEIMSGPQADIKVGNALPLRNIPPGVLIHNIELYPGHGARVVRSAGGSAQLMA--KEGDYAHVRLPSGEVRLFPLDCRATIGQVGNVEHENIVIGKAGRARW-----LGIRPTVRGVVMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_EDWI9 (50S ribosomal protein L2 OS=Edwardsiella ictaluri (strain 93-146) GN=rplB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 66/183 (36.07%), Postives = 96/183 (52.46%), Query Frame = 3 Query: 162 QFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 Q+R +DF + VV + +DP R A +A V ++ ++ +AA+G+ G + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + IP+ CRA +G+V + L KAG A R P VRG AMNPV+HP Sbjct: 61 QYRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDG-----ERRYILAAKGLKAGDQIQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGAYVTLRLRSGEMRKIPADCRATLGEVGNAEHMLRVLGKAGAARW-----RGVRPTVRGTAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_BORGA (50S ribosomal protein L2 OS=Borrelia garinii GN=rplB PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22 Identity = 72/221 (32.58%), Postives = 116/221 (52.49%), Query Frame = 3 Query: 51 QAQSLSPSKEMGRVIRAQRKGAGSVFKSHTHHRKGPAQFRSLDFGERNGY-LKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 + + L ++ I +R+G G H RK +R +DF R+ + + VA I +DP R A +A + ++ +K I+ +G+ G + G A + +GN LP+ +IP G + N+E +VG G L R++G YA+I++ D + VKL SG ++I C A IG++ + KAG + ++ +R PKVRGVAMNPV+HP Sbjct: 36 KGKKLKSGRDSSGRISIRRRGGG-------HKRK----YRLIDFNRRDKFSIPARVASIEYDPNRSANIALLVYKDG-----EKRYIISPKGIKVGDVLESGPNAPIKIGNALPLENIPIGRTIHNIELNVGKGGQLVRSAGGYAMILA--SDGNYVTVKLSSGEMRLIFKKCIATIGEIGNEDYANVSIGKAGKS--RWLGRR---PKVRGVAMNPVDHP 233
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_MYCAP (50S ribosomal protein L2 OS=Mycoplasma agalactiae (strain PG2) GN=rplB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 71/217 (32.72%), Postives = 105/217 (48.39%), Query Frame = 3 Query: 66 SPSKEMGRVIRAQRKGAGSVFKSHTHHRKGPAQ--FRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHP 710 +P K + VI + G + K H+ G + +R +DF + V I +DP R A + + + +K +A EG+ GQ V G ++VGN LP+ +IPEG V NVE G G++AR++G A I+ + D ++L SG + I + CRA IG V G + L KAG + H P VRG MNP++HP Sbjct: 29 APEKSL-LVILKKNSGRNNQGKITVRHQGGRVKRYYRIIDFKRNKDDIPATVKSIEYDPNRSANICLLAYADG-----EKRYILAPEGIKVGQKVVSGNNVDILVGNSLPLSNIPEGTFVHNVEMQPGGGGIIARSAGTSAQILGKDDDGKYVVLRLKSGEMRRILARCRATIGTVGNGEHSLVLLGKAGRSRH-----LGVRPTVRGSVMNPIDHP 234
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_THEPX (50S ribosomal protein L2 OS=Thermoanaerobacter sp. (strain X514) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 78 EMGRVIRAQRKGAGSVFKSHT-HHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 E V+ + G +V+ T HR G ++R +DF + G VA I +DP R A +A + + +K IA G+ G + G+ + VGN LP+R+IP G ++ N+E G G L RA+G A +++ + D +V++PSG ++I + CRA IGQV+ + KAG R+ W P VRG AMNPV+HP Sbjct: 30 EKSLVVTLTKTGGRNVYGRITVRHRGGGHKRKYRIIDFKRDKDGIPGKVAAIEYDPNRTAYIALIHYLDG-----EKRYIIAPYGLKVGDIIESGENVDIKVGNALPLRNIPVGTIIHNIELIPGKGGQLVRAAGTAAQLMA--KEGDYVQVRMPSGEIRLIKADCRATIGQVSNLDHENVKIGKAG---------RSRWLGIRPTVRGSAMNPVDHP 231
BLAST of FC931486 vs. ExPASy Swiss-Prot
Match: RL2_THEP3 (50S ribosomal protein L2 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplB PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 73/218 (33.49%), Postives = 110/218 (50.46%), Query Frame = 3 Query: 78 EMGRVIRAQRKGAGSVFKSHT-HHRKG--PAQFRSLDFGERNGYLKGVVAEIIHDPGRGAPLARVTFRHPFRYMKQKELFIAAEGMYTGQFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHP 710 E V+ + G +V+ T HR G ++R +DF + G VA I +DP R A +A + + +K IA G+ G + G+ + VGN LP+R+IP G ++ N+E G G L RA+G A +++ + D +V++PSG ++I + CRA IGQV+ + KAG R+ W P VRG AMNPV+HP Sbjct: 30 EKSLVVTLTKTGGRNVYGRITVRHRGGGHKRKYRIIDFKRDKDGIPGKVAAIEYDPNRTAYIALIHYLDG-----EKRYIIAPYGLKVGDIIESGENVDIKVGNALPLRNIPVGTIIHNIELIPGKGGQLVRAAGTAAQLMA--KEGDYVQVRMPSGEIRLIKADCRATIGQVSNLDHENVKIGKAG---------RSRWLGIRPTVRGSAMNPVDHP 231 The following BLAST results are available for this feature:
BLAST of FC931486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931486 ID=FC931486; Name=FC931486; organism=Citrus clementina; type=EST; length=711bpback to top |