FC931496

Overview
NameFC931496
Unique NameFC931496
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 62/163 (38.04%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  250 IALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            +ALNP   I  KL +   +SH+   FRF      + LGL V   I   A +      + K  +R YTP S  +  G+FDL++KVY +         G MSQH  SL  G +V+VKGP+  + Y           P   K + MI+GGTGITP+ QV++AILK+
Sbjct:  665 VALNPRVKIPCKLIEKVSLSHDVRRFRFGLPSEDQVLGLPVGKHIFLCANV------DDKLCMRAYTPSSTIDVVGYFDLVVKVYFKDVHPRFPNGGVMSQHLDSLSLGSIVDVKGPLGHIEYLGKGNFTVHGKPKFAKKLAMISGGTGITPIYQVMQAILKD 821          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_CHICK (NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN=CYB5R2 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18
Identity = 79/219 (36.07%), Postives = 101/219 (46.12%), Query Frame = 1
Query:   94 EAFGGQPKSDFNKFRFPFGAIAAVAGGVSYYCYFSSPNLVHLDQINEETGPKIAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRYS--------PNMK--------KHIGMIAGGTGITPMLQVIEAI 669
            EAF G P            A+AAVA  V          L+ L       G  + L +P       L     +SH++  FRF    P   LGL V   +   A +      N   V+R YTP+S  E KG+ DL+IKVY        PEG KMSQ+  S+K GDV++ +GP   L Y         P+ K        KH+G+IAGGTGITPMLQ+I  I
Sbjct:    2 EAFSGTPV---------VVAVAAVAATVLL--------LLLLRGAGRRPGRPVTLRDPQAKYPLPLVGKEEISHDTKKFRFGLPSPDHVLGLPVGQHVYLSAKI------NGNLVIRAYTPVSSDETKGYVDLIIKVYYKNVNPKFPEGGKMSQYLDSMKIGDVIDFRGPNGLLVYKGSGTFMIKPDKKSEAQRKFAKHLGVIAGGTGITPMLQLIRHI 197          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_CUCMA (Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17
Identity = 61/180 (33.89%), Postives = 92/180 (51.11%), Query Frame = 1
Query:  205 NLVHLDQINEE-TGPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFD--PSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            N  HL  I E     ++AL P++ I  KL     +SH+  +FRF+        LGL V   I   A +      + K  +R YTP S  +  G F+L++KVY +G          MSQ+  S++ G  ++VKGP+  + Y+          P   + + M+AGGTGITP+ QV++AILK+
Sbjct:  640 NFSHLAPIREAPVSRRVALAPNEKIPCKLISKTSISHDVRVFRFALPGGQDQALGLPVGKHIFICATV------DGKLCMRAYTPTSSIDEMGFFELVVKVYFKGVHPKFPNGGIMSQYLDSMEVGSTLDVKGPLGHIEYTGRGNFMVHGKPRFARRLAMLAGGTGITPIYQVVQAILKD 813          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_SOYBN (Inducible nitrate reductase [NADH] 1 OS=Glycine max GN=INR1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 64/178 (35.96%), Postives = 87/178 (48.88%), Query Frame = 1
Query:  211 VHLDQINEETGP--KIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKL-GLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGK---------MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            + L  I E   P   +AL P + I  KL     +SH+  LFRF       L GL V   I     + +      K  +R YTP S     G+FDL++KVY +G          MSQH  SL  G V++VKGP+  + Y+          P     + M+AGGTGITP+ QV++AILK+
Sbjct:  610 IPLTPIKEVITPMRSVALIPREKIPCKLISKTSISHDVRLFRFGLPSDGLLMGLAVGKHIFLCVTVDE------KLCMRAYTPTSSVHEVGYFDLVVKVYFKGVHPKFPNGGIMSQHLDSLPIGSVLDVKGPLGHIEYTGRGNFLVHGKPRFATRLAMLAGGTGITPIYQVVQAILKD 781          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_MOUSE (NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=Cyb5r2 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.127e-17
Identity = 60/166 (36.14%), Postives = 87/166 (52.41%), Query Frame = 1
Query:  259 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRYS--------------PNMK--KHIGMIAGGTGITPMLQVIEAILKN 678
            +P+      L +  ++SHN+  FRF    P   LGL V + +   A +      N + V+R YTP+S  + +G  DL+IK+Y        PEG KM+Q+  ++K GD +  +GP  +L Y+              P  K   H+GMIAGGTGITPMLQ+I  I K+
Sbjct:   13 DPEAKYPLPLIEKEQISHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQI------NNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKANKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKD 172          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA2_BRANA (Nitrate reductase [NADH], clone PBNBR1412 OS=Brassica napus GN=NIA2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 71/194 (36.60%), Postives = 95/194 (48.97%), Query Frame = 1
Query:  190 YFSSPNL-VH--------LDQINEETGPK-IAL-NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPE---------GKMSQHFASLKPGDVVEVKGPIEKLRY----------SPNMKKHIGMIAGGTGITPMLQVIEAILKN 678
            Y SSPN+ VH        L  I E    K IAL NP + +   L +   +SH+   FRF+      +LGL V   I   A +      N K  +R YTP S  +A GH DL++KVY +         G MSQH  SL  G V+ +KGP+  + Y           P   K + M+AGG GITP+ QVI++IL +
Sbjct:  618 YDSSPNVSVHGGSTAVSLLAPIKELAPSKNIALVNPREKVPVTLIEKTSISHDVRRFRFALPSEDQQLGLPVGKHIFLCANI------NDKLCLRAYTPTSTVDAVGHIDLVVKVYFKDVHPRFPNGGLMSQHLDSLPIGSVLNIKGPLGHIEYLGKGNFMVTGKPKFAKKLAMLAGGPGITPIYQVIQSILSD 805          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA_LOTJA (Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 61/174 (35.06%), Postives = 89/174 (51.15%), Query Frame = 1
Query:  247 KIALNPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEG---------KMSQHFASLKPGDVVEVKGPIEKLRYSPN----------MKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            K+AL P + I  KL     +SH+  +FRF+      +LGL V   I   A +      + K  +R YTP S  +  G+F+L++KVY +G          MSQH  SL  G  ++VKGP+  + Y+              K + M+AGGTGITP+ QV +AILK+   H+ +  V
Sbjct:  638 KVALIPREKIPCKLISRTSISHDVRVFRFALPSEDQQLGLPVGKHIFLCATV------DGKLCMRAYTPTSGVDEVGYFELVVKVYFKGVHPKFPNGGAMSQHLDSLPIGSDLDVKGPLGHIEYTGRGNFLVHGKHRFAKKLAMLAGGTGITPIYQVAQAILKDPEDHTKMYVV 805          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NIA1_ORYSJ (Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. japonica GN=NIA1 PE=2 SV=3)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 71/199 (35.68%), Postives = 98/199 (49.25%), Query Frame = 1
Query:  154 IAAVAGGVSYYCYFSSPNLVHLDQINEET---GPKIALNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAK-LGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEGK-MSQHFASLKPGDVVEVKGPIEKLRYS----------PNMKKHIGMIAGGTGITPMLQVIEAILKNQ 681
            I   AG  S      + NL  L  I E      P    +P   +  +L D   +S +  LFRF+   S + LGL V   I   A +    EG  K  +R YTP S  +  GHFDLLIKVY        P+G  M+Q+  SL  G  ++VKGP+  + Y+          P   + + MIAGG+GITPM QVI+++L++Q
Sbjct:  616 ITTGAGYSSDNSVHGASNLSQLAPIREAIKAPAPVALSSPRDKVPCQLVDKKELSRDVRLFRFALPSSDQVLGLPVGKHIFVCASI----EG--KLCMRAYTPTSMVDEVGHFDLLIKVYFKNEHPKFPDGGLMTQYLDSLPVGAYIDVKGPLGHVEYTGRGEFVINGKPRNARRLAMIAGGSGITPMYQVIQSVLRDQ 808          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R2_RAT (NADH-cytochrome b5 reductase 2 OS=Rattus norvegicus GN=Cyb5r2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 1
Query:  259 NPDKWIGFKLQDTARVSHNSHLFRFSF-DPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVY--------PEG-KMSQHFASLKPGDVVEVKGPIEKLRYS--------------PNMK--KHIGMIAGGTGITPMLQVIEAILKN 678
            +P+      L +  +++HN+  FRF    P   LGL V + +   A +      N + V+R YTP+S  + +G  DL+IK+Y        PEG KM+Q+  ++K GD +  +GP  +L Y+              P  K   H+GMIAGGTGITPMLQ+I  I K+
Sbjct:   13 DPEAKYPLPLIEKEQINHNTRRFRFGLPSPDHVLGLPVGNYVHLLAQI------NNELVIRAYTPVSSDDDQGFVDLIIKIYFKNVHPKYPEGGKMTQYLENMKIGDTILFRGPTGRLFYNEPGTLLIKTDKTSEPEKKLVHHLGMIAGGTGITPMLQLIRHITKD 172          
BLAST of FC931496 vs. ExPASy Swiss-Prot
Match: NB5R5_MOUSE (NADH-cytochrome b5 reductase-like OS=Mus musculus GN=Cyb5rl PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.190e-17
Identity = 47/151 (31.13%), Postives = 83/151 (54.97%), Query Frame = 1
Query:  256 LNPDKWIGFKLQDTARVSHNSHLFRFSFDPSAKLGLDVASCILTRAPLGQDAEGNTKYVVRPYTPISDTEAKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNQMTHSGVTAV 708
            L+P+ ++ F +    +V+ +++L RF+   +++LGL     ++ R  +      +   + R YTPIS   A+G+FD+LIK Y  G MSQ+  S + GD    +GP     Y P     + M+A GTG+ PM+ ++++I  ++   + VT V
Sbjct:   73 LSPETFLAFHISTMEKVTKDTYLVRFTLPGNSRLGLRPGQHLILRGVV------DGLEIQRAYTPISPVTAEGYFDVLIKCYRTGLMSQYVESWRTGDTAFWRGPFGSFLYEPKKYGELLMLAAGTGLAPMVPILQSITDDEDDETFVTLV 217          
The following BLAST results are available for this feature:
BLAST of FC931496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
NIA_SPIOL3.282e-1838.04Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NB5R2_CHICK3.282e-1836.07NADH-cytochrome b5 reductase 2 OS=Gallus gallus GN... [more]
NIA_CUCMA1.629e-1733.89Nitrate reductase [NADH] OS=Cucurbita maxima PE=2 ... [more]
NIA1_SOYBN2.127e-1735.96Inducible nitrate reductase [NADH] 1 OS=Glycine ma... [more]
NB5R2_MOUSE2.127e-1736.14NADH-cytochrome b5 reductase 2 OS=Mus musculus GN=... [more]
NIA2_BRANA3.629e-1736.60Nitrate reductase [NADH], clone PBNBR1412 OS=Brass... [more]
NIA_LOTJA4.740e-1735.06Nitrate reductase [NADH] OS=Lotus japonicus GN=NIA... [more]
NIA1_ORYSJ4.740e-1735.68Nitrate reductase [NADH] 1 OS=Oryza sativa subsp. ... [more]
NB5R2_RAT4.740e-1735.54NADH-cytochrome b5 reductase 2 OS=Rattus norvegicu... [more]
NB5R5_MOUSE6.190e-1731.13NADH-cytochrome b5 reductase-like OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC34105G03EF PostHarvP1 Citrus clementina cDNA clone C34105G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931496 ID=FC931496; Name=FC931496; organism=Citrus clementina; type=EST; length=710bp
GACTTTTCTTTGCTTTGCTTCTCTCTCCAACATTAGAAAATGGCTACGAC
CTTCTTCAGAAGACTGGCTAAAGCTACTCCAATTGCATTCAACGAGGCAT
TTGGAGGGCAACCCAAGTCCGATTTCAACAAATTTCGATTTCCCTTTGGA
GCAATCGCTGCTGTTGCTGGTGGAGTCTCCTATTACTGTTACTTTTCATC
CCCAAATTTGGTTCATCTAGATCAAATCAATGAAGAGACGGGTCCAAAAA
TTGCTCTCAATCCGGACAAGTGGATTGGATTTAAGTTGCAAGACACTGCA
AGGGTAAGCCACAATAGTCATTTGTTCAGGTTTTCATTTGATCCATCTGC
CAAGTTGGGTTTGGATGTTGCTTCATGCATCCTTACAAGGGCTCCATTAG
GACAAGATGCTGAAGGAAATACAAAATATGTTGTACGGCCGTATACTCCT
ATATCAGATACAGAAGCTAAGGGACACTTTGACTTGTTAATTAAGGTTTA
TCCTGAGGGTAAAATGAGTCAGCATTTTGCTAGCTTAAAACCAGGGGATG
TAGTTGAAGTGAAAGGACCCATTGAAAAGCTCCGATACTCTCCCAATATG
AAGAAACACATCGGCATGATAGCTGGTGGCACAGGTATAACTCCTATGCT
TCAGGTAATTGAGGCTATACTGAAGAATCAGATGACACACTCAGGTGTCA
CTGCTGTATG
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