FC931503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR1_CAVPO (Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.575e-25 Identity = 77/196 (39.29%), Postives = 105/196 (53.57%), Query Frame = 2 Query: 68 VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQI--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSTASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK 646 V K L + G P +SD ++ + + LK E VLL+ L+LS DPYMR +L G + G VA+V++S + + +V +GW + + + L+ +PLS G +GMPG+TAY GL EVC K GE V VS A+GAVG +VGQ AKL GC VVG+AGS EK+ LK Sbjct: 2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGE-----VLLEALFLSVDPYMRIASKRLKE---------GAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 183
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR1_PIG (Prostaglandin reductase 1 OS=Sus scrofa GN=PTGR1 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.975e-25 Identity = 75/196 (38.27%), Postives = 106/196 (54.08%), Query Frame = 2 Query: 68 VSNKRVILSNYVTGFPKESDMKITSGSIK-LKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQI--LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEVCSPKKGEYVYVSTASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLK 646 V K L + G+P S+ ++ + + LK E VLL+ L+L+ DPYMR KL G+ + G VA+V++S + + +V GW +S+ + L+ +PLS G +GMPG+TAY GL ++C K GE V V+ A+GAVG +VGQ AKL GC VVG+AGS EKV LK Sbjct: 2 VRAKSWTLKKHFVGYPTPSNFELKTVELPPLKNGE-----VLLEALFLTVDPYMRIAARKLKE---------GDMMMGEQVARVIESKNAAFPTGTIVVALLGWTTHSISDGKNLERLLAEWPDTLPLSLTLGTVGMPGLTAYFGLLDICGLKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVACLK 183
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR2_BOVIN (Prostaglandin reductase 2 OS=Bos taurus GN=PTGR2 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 67/213 (31.46%), Postives = 109/213 (51.17%), Query Frame = 2 Query: 77 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSTASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNSLDLMTLLLQEEADL 694 +RV+L++ G P + ++ ++ V EG V ++ LYLS DPYMR RM++ ++ + + ++G GV + +S H N+ K D V F + ++ IL K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G L GQ +L GC VVG G+ EK L + L + +E ++ Sbjct: 4 QRVVLNSRPGKNGHPVAENFRVEEVNLPDCVNEGQ---VQVRTLYLSVDPYMRCRMNEDTGSDYITPWQLSQVVDGGGVGIIEESKHTNFMKGDFVTSFYWPWQTKVILDGNILEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHITAGSNQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGTPEKCLFLTSELGFDAAINYKEGNV 213
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17 Identity = 63/200 (31.50%), Postives = 101/200 (50.50%), Query Frame = 2 Query: 77 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSTASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNSL 655 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V F + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ L GC VVG G+ EK LL + L Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSEL 200
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16 Identity = 62/200 (31.00%), Postives = 100/200 (50.00%), Query Frame = 2 Query: 77 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGFTGWEEYSLVTAPQILIKI--QHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSTASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNSL 655 +RV+L++ G P + ++ + + EG V ++ LYLS DPYMR RM++ ++ + + ++G G+ + +S H N K D V F + ++ L K+ Q D LSY+ G +GMPG+T+ G+ E + + + VS A+GA G + GQ GC VVG G+ EK LL + L Sbjct: 4 QRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQ---VQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL 200
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR2_RAT (Prostaglandin reductase 2 OS=Rattus norvegicus GN=Ptgr2 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16 Identity = 63/200 (31.50%), Postives = 100/200 (50.00%), Query Frame = 2 Query: 77 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGF-TGWEEYSLVTAPQI-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSTASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNSL 655 +RV+L + G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ + +S H AK D V F W+ +++ + + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G+ EK L + L Sbjct: 4 QRVVLDSRPGKNGNPVAENFRVEEVSLPDTINEGQ---VRVRTLYLSVDPYMRCKMNEETGADYLAPWQLAQVADGGGLGVIEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHVSAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTHEKCLFLTSEL 200
BLAST of FC931503 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16 Identity = 63/200 (31.50%), Postives = 101/200 (50.50%), Query Frame = 2 Query: 77 KRVILSNYV--TGFPKESDMKITSGSIKLKVAEGSKDTVLLKNLYLSCDPYMRWRMSKLDRPSFVDSFHPGEPINGYGVAKVLDSTHPNYAKDDLVWGF-TGWEEYSLVTAPQI-LIKIQHTDVPLSYYTGILGMPGVTAYAGLYEV--CSPKKGEYVYVSTASGAVGQLVGQFAKLAGC-YVVGSAGSKEKVDLLKNSL 655 +RV+L++ G P + ++ S+ + EG V ++ LYLS DPYMR +M++ ++ + + +G G+ V +S H K D V F W+ +++ + + Q D LSY+ G +GMPG+T+ G+ E S + + VS A+GA G L GQ L GC VVG G++EK L + L Sbjct: 4 QRVVLNSRPGKNGNPVAENFRVEEFSLPDALNEGQ---VQVRTLYLSVDPYMRCKMNEDTGTDYLAPWQLAQVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL 200 The following BLAST results are available for this feature:
BLAST of FC931503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931503 ID=FC931503; Name=FC931503; organism=Citrus clementina; type=EST; length=699bpback to top |