FC931505

Overview
NameFC931505
Unique NameFC931505
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length519
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.807e-59
Identity = 111/143 (77.62%), Postives = 119/143 (83.22%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            KIKIGINGFGRIGRLVARVAL+RDDVELVAVNDPFI+TDYMTYMFKYDSVHGQWK++EL VKD  TLLFG+KPV VF  RNPEEIPWA TGA+ +VESTGVFT               V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    4 KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELTVKDSNTLLFGQKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNENEYKPE 146          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 5.807e-59
Identity = 111/142 (78.17%), Postives = 119/142 (83.80%), Query Frame = 2
Query:   92 IKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            IKIGINGFGRIGRLVARV LQR+D ELVAVNDPFI+T+YMTYMFKYDSVHGQWKH+++KVKDEKTLLFGEK V VFG RNPEEIPW  TGA+YVVESTGVFT               V+ISAPSKDAPMFVVGVNE EYKPE
Sbjct:    4 IKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPE 145          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 2.882e-58
Identity = 111/148 (75.00%), Postives = 119/148 (80.41%), Query Frame = 2
Query:   74 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            M    KIKIGINGFGRIGRLVARVAL RDD+ELV VNDPFISTDYM+YMFKYDSVHG+WKH+E+ VKD KTLLFGEK VAVFG RNPEEIPW + GAEYVVESTGVFT               VVISAPSKDAPMFVVGVNE +YK +
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALTRDDIELVGVNDPFISTDYMSYMFKYDSVHGKWKHHEVNVKDSKTLLFGEKSVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKEKASAHLKAGAKKVVISAPSKDAPMFVVGVNEHQYKSD 148          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 4.916e-58
Identity = 111/134 (82.84%), Postives = 115/134 (85.82%), Query Frame = 2
Query:  116 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKH+ELKVKDEKTLLFGEK V VFG RNPEEIPWA+ GA++VVESTGVFT               VVISAPSKDAPMFVVGVNEKEYKPE
Sbjct:    1 GRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGEKSVRVFGIRNPEEIPWAEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPE 134          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PD_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 2 OS=Zea mays GN=GAPC2 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 1.430e-57
Identity = 108/140 (77.14%), Postives = 117/140 (83.57%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++ +KD KTLLFGEKPV VFG RNPEEIPW + GAEYVVESTGVFT               VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIALKDSKTLLFGEKPVTVFGIRNPEEIPWGEAGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.868e-57
Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            KIKIGINGFGRIGRLVARVALQ DDVELVAVNDPFI+T+YMTYMFKYD+VHG WKH+++K+KD+KTLLFGEKPV VFG RNPEEIPW + GA+YVVESTGVFT               VVISAPSKDAPMFVVGVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTEYMTYMFKYDTVHGHWKHSDIKLKDDKTLLFGEKPVTVFGVRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDKY 142          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.868e-57
Identity = 112/148 (75.68%), Postives = 120/148 (81.08%), Query Frame = 2
Query:   74 MAGDKKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            M    KIKIGINGFGRIGRLVARVALQRDD+ELVAVNDPFIST+ +T +FKYDSVHGQWK +E+KVKDEKTLLFGEK VAVFG RNPEEIPW + GAEYVVESTGVFT               VVISAPSKDAPMFVVGVNE EYK +
Sbjct:    1 MGSTGKIKIGINGFGRIGRLVARVALQRDDIELVAVNDPFISTESLTSLFKYDSVHGQWKKHEVKVKDEKTLLFGEKHVAVFGCRNPEEIPWGEVGAEYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSD 148          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSJ (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. japonica GN=GAPC PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.440e-57
Identity = 107/140 (76.43%), Postives = 117/140 (83.57%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVFT               VVISAPSKDAPMFV GVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKY 142          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_ORYSI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Oryza sativa subsp. indica GN=GAPC PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 2.440e-57
Identity = 107/140 (76.43%), Postives = 117/140 (83.57%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEY 508
            KIKIGINGFGRIGRLVARVALQ +DVELVAVNDPFI+TDYMTYMFKYD+VHGQWKH+++K+KD KTLL GEKPV VFG RNP+EIPWA+ GAEYVVESTGVFT               VVISAPSKDAPMFV GVNE +Y
Sbjct:    3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVCGVNEDKY 142          
BLAST of FC931505 vs. ExPASy Swiss-Prot
Match: G3PC_MESCR (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Mesembryanthemum crystallinum GN=GAPC PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 5.435e-57
Identity = 109/143 (76.22%), Postives = 118/143 (82.52%), Query Frame = 2
Query:   89 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISTDYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVAVFGFRNPEEIPWAKTGAEYVVESTGVFTXXXXXXXXXXXXXXXVVISAPSKDAPMFVVGVNEKEYKPE 517
            K+K+GINGFGRIGRLVARV LQRDD ELVAVNDPFISTDYMTYMFKYDSVHGQ K +E+K+KDEKTLLFGE PVAVFG RNPEEIPW + GA++VVESTGVFT               VVISAPSKDAPMFVVGVNE EYK +
Sbjct:    3 KVKVGINGFGRIGRLVARVILQRDDCELVAVNDPFISTDYMTYMFKYDSVHGQCKSHEIKLKDEKTLLFGETPVAVFGCRNPEEIPWGQAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSD 145          
The following BLAST results are available for this feature:
BLAST of FC931505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
G3PC_PEA5.807e-5977.62Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA5.807e-5978.17Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_PINSY2.882e-5875.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TOBAC4.916e-5882.84Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PD_MAIZE1.430e-5777.14Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PX_HORVU1.868e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_TAXBA1.868e-5775.68Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSJ2.440e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ORYSI2.440e-5776.43Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_MESCR5.435e-5776.22Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionC34105G12EF PostHarvP1 Citrus clementina cDNA clone C34105G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931505 ID=FC931505; Name=FC931505; organism=Citrus clementina; type=EST; length=519bp
GAAAAACAACGCGCCCAACCAAAATTGCAGCGTTAAACAAACCTTCACTA
CTTTCTCATTTTCGATAATATCAATGGCCGGAGACAAGAAGATTAAGATC
GGAATCAACGGTTTCGGAAGGATCGGCCGTTTGGTTGCGAGAGTCGCACT
CCAGAGGGATGATGTGGAGCTGGTGGCTGTCAACGATCCTTTCATCTCCA
CTGATTACATGACATACATGTTTAAGTACGATAGTGTTCACGGTCAGTGG
AAGCACAACGAGTTGAAGGTCAAGGACGAGAAGACCCTCCTCTTCGGTGA
GAAGCCAGTCGCTGTTTTCGGATTCAGGAACCCAGAGGAGATCCCATGGG
CAAAGACTGGAGCCGAGTATGTTGTGGAATCAACTGGAGTGTTCACTGAC
AAGGACAAGGCTGCTGCTCACTTGAAGGGTGGTGCCAAGAAGGTCGTTAT
CTCCGCCCCTAGCAAGGATGCTCCCATGTTTGTTGTGGGCGTCAACGAGA
AAGAATACAAGCCAGAGCT
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