FC931552

Overview
NameFC931552
Unique NameFC931552
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13
Identity = 55/220 (25.00%), Postives = 98/220 (44.55%), Query Frame = 3
Query:    3 MGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESIDFQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            M Y+      APYG  W+ +RK++   +L    LE   +VR +E+   +K ++           ++ ++   + LTF ++  +I     S + + E+G E       + E   + G F +GD IP +  +D QG    MK   K+ DD++    +EH   +       GK D +D +++    D   G       +KA  L L   G++++   I W L+
Sbjct:  112 MAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGE----RIVVA---DMLTFAMA-NMIGQVMLSKRVFVEKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIAWMDLQGIEKGMKKLHKKFDDLLTKMFEEH---EATSNERKGKPDFLDFIMA--NRDNSEGERLSITNIKALLLNLFTAGTDTSSSVIEWALT 318          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13
Identity = 55/198 (27.78%), Postives = 97/198 (48.99%), Query Frame = 3
Query:   27 ALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIP---WLESIDFQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVLLSKLQEDAVMGGHTRDIVVKATALIL 611
            A APYG+YW+ ++ I    LLS+  +   K +R  E+   I+ + +  + +   P+ V +S+L   LT +I  +   G+++S+K   E G +   I RA    + L G F +G+ IP   W++ I  Q H   M+   K  D+ +   +KEH     +    + + DL+D LL+   + + +     D+ +  TA  L
Sbjct:  117 AFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVEN--ASSCSPPSPVNLSQLFMTLTNDIICRAALGRKYSSK---EDGIDVENIVRAF---SALVGEFPIGEYIPSLSWIDKIRGQDH--KMEEVDKRFDEFLERVVKEH-----EDANKDTRSDLVDTLLTIQSDKSALKLIIWDMFLAGTATSL 299          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12
Identity = 57/226 (25.22%), Postives = 107/226 (47.35%), Query Frame = 3
Query:    9 YDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESID-FQGHVGSMKSTAKEIDDVIGNWLKEHL--QKKLQGEGHNGKGDLIDVLLSKLQEDAVMGGHTRDIVVKATALILIL-----TGSESTYLGIIWTLS 662
            Y +     +P+G+YW  +R I    LLS+ R++  + VR  E    I+ +   C  +  N     + + +  LT NI+ ++  G+ +   D  E G +A  I   +++   L   F +GD IPWL+ ++   G    ++  AK++D  + + ++EH+   KK +    +   D +DVLL       +  G   D  ++  +L  IL      G+++ Y  + WT++
Sbjct:  114 YGSKDVGFSPFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDASVIN-----LGEHLCFLTNNITSRVALGRTY---DERESGIDAKDI---LEQFLQLLDTFNVGDYIPWLKWVNKITGLDTKVEKIAKKLDTFLDSVIEEHIIRNKKEEYAITDEAKDFVDVLLE------IQNGKETDFPLQRDSLKAILLDAFAAGTDTIYTNLDWTMA 322          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71A3_SOLME (Cytochrome P450 71A3 (Fragment) OS=Solanum melongena GN=CYP71A3 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.051e-12
Identity = 56/220 (25.45%), Postives = 107/220 (48.64%), Query Frame = 3
Query:    9 YDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESID-FQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKG-DLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            Y +   + +P+G+YWR IR I    LLS+ R++  +  R  E    I+ L  + + ++   +   +  L   L +NI  ++  GK+++    +E  ++A      + +   L G F +GD IP LE ++   G    +   AK++D  +   ++ H+ +  + E   G+  DL+DVLL ++Q     G   +   +KA  L     G+++ Y  + WT++
Sbjct:  103 YGSKDVSFSPHGEYWRQIRSITVLHLLSNKRVQSYRAAREEETSNMIEKLKQMSNSSS---SATDLRDLFCWLAYNIINRVALGKKYN----DEIDAKA-----TLDKFVELLGTFNVGDYIPCLEWVNKITGFDSKVDKVAKDLDTFLEFVIEAHMIRNEKEENRAGESKDLVDVLL-EIQNGKETGFPIQRDSLKALLLDPFSAGTDTIYTVLEWTMT 309          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.793e-12
Identity = 55/223 (24.66%), Postives = 102/223 (45.74%), Query Frame = 3
Query:    3 MGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSE---NAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESIDFQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            + Y+ +    + +G YWR +RKI T ELL++ R++  + +R  EV   +K + +  SE   + FN     +++ I  +TF I+ +   GK+        +  + +  N  + +   L G F + D  P        G  G ++   +  D V+ + + EH  +    E      DL+DVLL K Q+++       D  +KA    + + G E++   + W +S
Sbjct:  121 VSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFN-----LTQSIYSMTFGIAARAAFGKK-------SRYQQVFISN--MHKQLMLLGGFSVADLYPSSRVFQMMGATGKLEKVHRVTDRVLQDIIDEHKNRNRSSEEREAVEDLVDVLL-KFQKESEF--RLTDDNIKAVIQDIFIGGGETSSSVVEWGMS 326          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12
Identity = 57/225 (25.33%), Postives = 105/225 (46.67%), Query Frame = 3
Query:    3 MGYDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESID-FQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNG----KGDLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            M Y     A APYG YWR IRKI T ELLS+ R++   H+R  E    I+ ++S    +A +P  ++  KL   L          G   S   + ++  +       +++A  + G F + D  P L+ +         ++   +  D ++ + L++H++K+ + +  NG    + DL+DVLL +L+E   +        +KA    +   G++++   + W +S
Sbjct:  112 MVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHS----SAGSPIDLS-GKLFSLL----------GTTVSRAAFGKENDDQDEFMSLVRKAITMTGGFEVDDMFPSLKPLHLLTRQKAKVEHVHQRADKILEDILRKHMEKRTRVKEGNGSEAEQEDLVDVLL-RLKESGSLEVPMTMENIKAVIWNIFAAGTDTSASTLEWAMS 320          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.216e-12
Identity = 51/211 (24.17%), Postives = 104/211 (49.29%), Query Frame = 3
Query:   39 YGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIP---WLESIDFQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            YG+YWR ++ I   +LLS+ R++  + VR  E +  +K +         +   V +S +  QLT ++  +   G+++ A D  E G +   I   ++E   L G   +GD +P   W+  I+  G    +   AKE+D+    +L++ + ++L+      + + +D+LL   + ++      RD  +KA  L +   G+++T + + W ++
Sbjct:  131 YGEYWRQLKTICVVQLLSNKRVQSFRSVREEETELLMKKI-------GDSSGNVNLSHMFTQLTNDVVCRSAIGRKYGAGD--ENGEKFLEI---LREFLELLGAISIGDFVPSLWWINRIN--GFDRRVDRIAKEMDE----FLEKVIHERLENPAAKAEENFVDILLEIYRNNSAGVSIDRD-SIKAIILDVFAAGTDTTAVVLEWAMT 322          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 54/214 (25.23%), Postives = 100/214 (46.73%), Query Frame = 3
Query:   27 ALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDL-YSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESID-FQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            A APYG+YWR ++ I    LL++  +   + +R  E+   I+ L  + CS    +P+ V +S+++  LT +I  ++  G+++S K       +   +   ++    L G F +G+ IP L  ID  +G    M+   K  D+ +   +KEH     +      + DL+D LL+ +Q D           +K     + L G+ +T   + W ++
Sbjct:  116 AFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSS---SPSPVNLSQILMTLTNDIICRVALGRKYSGK------KDGIDVENIVRTFAALLGEFPVGEYIPSLSWIDRIRGLDHKMEVVDKRFDEFLERVVKEH-----EEADKETRSDLVDKLLT-IQSDKTGQFELEKSALKLIIWDMFLAGTATTLSFLEWAMT 314          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C93A3_SOYBN (Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12
Identity = 51/215 (23.72%), Postives = 98/215 (45.58%), Query Frame = 3
Query:   24 FALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESIDFQGHVGSMKSTAKEIDDVIGNWLKEHLQKKLQGEGHNGKGDLIDVL--LSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTLS 662
            F  APYG YW+ ++K+  +ELL  H L+    VR  E   FIK +     +   +   V        L+ NI  ++I  +  + +D     +E   + + +K+A  L G F + D + +L+  D QG    ++      D V+   +K+  +++       GK +  D+L  L  + ED           +KA  L +++ G++++ + + W ++
Sbjct:  115 FLFAPYGPYWKFMKKLCMSELLGGHMLDQFLPVRQXETKKFIKRVL----QKGISGEAVDFGGEFITLSNNIVSRMIVSQTSTTED----ENEVEEMRKLVKDAAELSGKFNISDFVSFLKRFDLQGFNKRLEKIRDCFDTVLDRIIKQREEERRNKNETVGKREFKDMLDVLFDISEDESSEIKLNKENIKAFILDILIAGTDTSAVTMEWAMA 321          
BLAST of FC931552 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.162e-11
Identity = 56/226 (24.78%), Postives = 104/226 (46.02%), Query Frame = 3
Query:    9 YDNAIFALAPYGQYWRDIRKIATTELLSSHRLELLKHVRYSEVDTFIKDLYSLCSENAFNPAKVAISKLIEQLTFNISLKLIAGKRFSAKDYEEQGSEAWRINRAIKEATHLFGVFVLGDAIPWLESIDFQGHVGSMKSTAKEIDDVIGNWL-------KEHLQKKLQGEGHNGKG--DLIDVLLSKLQEDAVMGGHTRDIVVKATALILILTGSESTYLGIIWTL 659
            Y++++ A APYG YWR I+K++  ELL S  +   +H+R  E    ++    L S  A     V I++ + +LT N+   ++ G+   A+D              +++ T +FG F + D I   + +D QG    ++   +  D ++   +       K+  +   +GE  +G G  D +D+LL    ED       + + +KA  +     G+++T +   W L
Sbjct:  111 YESSL-AFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLR----LLSNRARAFEAVNITEELLKLTNNVISIMMVGEAEEARD-------------VVRDVTEIFGEFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKKGEQGSGDGIRDFLDILLD-CTEDENSEIKIQRVHIKALIMDFFTAGTDTTAISTEWAL 317          
The following BLAST results are available for this feature:
BLAST of FC931552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
C75A2_SOLME4.717e-1325.00Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71AJ_ARATH8.047e-1327.78Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME1.051e-1225.22Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C71A3_SOLME1.051e-1225.45Cytochrome P450 71A3 (Fragment) OS=Solanum melonge... [more]
C71DA_SOYBN1.793e-1224.66Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71D8_SOYBN5.216e-1225.33Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71A8_MENPI5.216e-1224.17Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C71AK_ARATH6.812e-1225.23Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C93A3_SOYBN8.897e-1223.72Cytochrome P450 93A3 OS=Glycine max GN=CYP93A3 PE=... [more]
C93B1_GLYEC1.162e-1124.78Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34106D05EF PostHarvP1 Citrus clementina cDNA clone C34106D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931552 ID=FC931552; Name=FC931552; organism=Citrus clementina; type=EST; length=664bp
ATATGGGTTATGACAACGCCATTTTTGCACTTGCTCCCTACGGTCAGTAC
TGGCGTGATATTCGCAAAATAGCCACCACAGAGCTTCTCTCAAGTCACCG
GCTTGAATTGCTGAAGCACGTTCGCTACTCTGAAGTTGACACTTTCATCA
AAGATTTGTACTCACTTTGCTCAGAAAACGCATTCAATCCTGCGAAGGTG
GCGATCAGCAAGTTAATCGAGCAGTTAACTTTCAATATAAGCCTGAAACT
GATAGCTGGGAAGCGATTTTCAGCTAAAGATTATGAGGAACAAGGCAGCG
AGGCTTGGCGTATCAATAGAGCAATAAAAGAAGCAACGCACCTATTCGGG
GTTTTCGTCTTGGGAGATGCCATACCATGGCTTGAATCGATTGACTTTCA
GGGTCATGTGGGATCTATGAAGAGTACTGCTAAGGAAATTGACGATGTGA
TCGGCAACTGGCTTAAAGAACATCTTCAAAAAAAATTACAGGGCGAAGGC
CATAATGGTAAAGGTGACCTCATAGACGTGTTGCTTTCAAAACTGCAAGA
AGATGCTGTGATGGGCGGACATACACGTGATATTGTCGTCAAAGCAACAG
CTCTAATTTTAATCCTCACAGGCTCAGAAAGCACGTATCTTGGAATAATT
TGGACGCTGTCCCT
back to top