FC931563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 1.162e-22 Identity = 67/183 (36.61%), Postives = 104/183 (56.83%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSS------MLKTLERYQ----KCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 526 MGRG++E+KRIEN NRQVTF+KRR G+LKKA E+ VLCDAEV ++IFS+ GKL ++C+ + + + LE+YQ K + ++SA E ++K + +Q R++ GE+L L KEL ++E L+ +R M+D + E++L + +K L R+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSA----------EIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDK----MMDHWRMHKRNEKMLEDEHKMLAFRV 169
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.162e-22 Identity = 68/196 (34.69%), Postives = 109/196 (55.61%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL 592 M RG++++KRIEN+ NRQVT++KRRNGL KKA+ELSVLCDA+V++I+ S+ KL+E+ S ++ K L ++YQK V + Q+ KL L+R R +GE L L +++ +L +D SLK IR + + + + + + K + + E ++ L L+ + ED +GL Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKA------VGVDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLKLIRERKYKVISNQIDTSKKKVRNVEEIHRNL-----------VLEFDARREDPHFGL 179
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.862e-21 Identity = 68/196 (34.69%), Postives = 113/196 (57.65%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTL-ERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGL 592 M RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+FS+ KL+E+ S ++ K + + YQ + + +V A + + Q+ KL L+ + LGE L L+ +EL LE +++ + K +R + + + + + + K + + K L ++ L+L AED YGL Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTIS----DVDVWATQYERM--QETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNKSQQDIQKNL---------IHELELR--AEDPHYGL 179
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.133e-20 Identity = 60/174 (34.48%), Postives = 100/174 (57.47%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRL 526 MGRG++E+++IENK NRQVTF+KRRNG++KKA EL+VLCDA+V+L++ S+ KL+ + S S+ K + YQK V Q+++ K+ L+R +G +L L EL +L+++++ ++ QIR+ + + + + K + L E + L L Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIE------GVDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAIIQIRNKKYHTIKNQTGTTRKKIKNLEERHTDLVMEL 168
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20 Identity = 61/170 (35.88%), Postives = 99/170 (58.24%), Query Frame = 2 Query: 86 GLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS-SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYL---KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQ--LNPSAED 577 GLLKKA EL++LCDA++ +IIFS+ GK++EF S SM + ++RYQK +S A +QQ Y ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ KE +L E N+ L + + + + + Q ++PS D Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGKMFEFSSPPISMREIIDRYQK---------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAASMEQKMVDPSMLD 162
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.499e-19 Identity = 62/198 (31.31%), Postives = 105/198 (53.03%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSS--SMLKTLERYQKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLKQRLMEGYQVNTLQLNPSAEDCGYGLK 595 MGRGR E+KRIEN RQ TF KRR+GL KKA EL+VLCDA++ L++FS GKLY F S + S+ + +ERY+ + ++ EL K+ + + L++ R + ++ LE+LE L+ +++++RS + + + + LQ+ + E L ++ + ++ ++ G LK Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELE------KVGSMCDLLEKQLRFMTVDDGEEYTVPSLEALEHNLEAAMRKVRSEKDRKIGGEICYLQNIIRGRQEERYGLCDKIAHAQTLKDVECGSTSLSNGLDLK 192
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.621e-16 Identity = 48/131 (36.64%), Postives = 78/131 (59.54%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERY--------------------QKCNYGAPEPNVSAREALELSSQQEYLKLKARYEALQRSQR 340 MGR ++++ RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y +K N G P+ + AL ++++Y K+ ++ + +S + Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY-ASTDMDKVLLKYTEYNEPHESRTNSDIVEALNKKENKGCESPDPDSSYALTPRTEEKYKKINEEFDNMIKSHK 130
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15 Identity = 42/89 (47.19%), Postives = 65/89 (73.03%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREALE 274 MGR ++++ RI ++ NRQVTF KR+ G++KKAYELSVLCD E+ALIIFS+ KLY++ +S+ M + L +Y + Y P +++ + +E Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQY-ASTDMDRVLLKYTE--YNEPHESLTNKNIIE 86
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15 Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREA 268 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82
BLAST of FC931563 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.376e-15 Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 2 Query: 8 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNVSAREA 268 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALIIF++ KL+++ +S+ M K L +Y + N EP+ S A Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQY-ASTDMDKVLLKYTEYN----EPHESRTNA 82 The following BLAST results are available for this feature:
BLAST of FC931563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931563 ID=FC931563; Name=FC931563; organism=Citrus clementina; type=EST; length=674bpback to top |