FC931564
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA3_ARATH (Cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Arabidopsis thaliana GN=CESA3 PE=1 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 96/283 (33.92%), Postives = 126/283 (44.52%), Query Frame = 3 Query: 3 GIQGPFYQGTGTFHRRDVVYG-----------------LC-------------------------------LDQIEH--QGNIVEDE---------LLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 668 GIQGP Y GTG R +YG LC LD IE +G +DE L K+FG S F+ S + GG S+ L EA V CGYE S WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + + SIP L Y LPA C+ TN +P++ + L+LFL Sbjct: 607 GIQGPVYVGTGCVFNRTALYGYEPPIKVKHKKPSLLSKLCGGSRKKNSKAKKESDKKKSGRHTDSTVPVFNLDDIEEGVEGAGFDDEKALLMSQMSLEKRFGQSAVFVASTLM----ENGGVPPSATPENLLKEAIHVISCGYEDKSDWGMEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYNGRLKFLERFAYVNTTIYPITSIPLLMYCTLPAVCLFTNQFIIPQISNIASIWFLSLFL 885
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30 Identity = 79/222 (35.59%), Postives = 114/222 (51.35%), Query Frame = 3 Query: 39 FHRRDVVYGL-CLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGY--SSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLE 695 F D+ GL D++E + + K+FG S FI S + GG ++N S + EA V CGYE + WG E+G +YG+ ED LTG +H +GW+S YC+P AF G A + + Q RWA G +EI FS+ P+ GKL+ + LAY+ + + SIP L Y +PA C++T +P + + LALFL +LE Sbjct: 660 FDLEDIEEGLEGYDELEKSSLMSQKNFEKRFGMSPVFIASTLM----ENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILE 877
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSJ (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 92/279 (32.97%), Postives = 125/279 (44.80%), Query Frame = 3 Query: 3 GIQGPFYQGTGTFHRRDVVYG---------------LC-------------------------------LDQIEH--QGNIVEDE---------LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 668 G+QGP Y GTG R +YG LC L+ IE +G+ +DE L K+FG S F+ S G S+ L EA V CGYE S WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + L SIP L Y LPA C++T +P++ + ++LFL Sbjct: 617 GLQGPVYVGTGCVFNRTALYGYEPPIKQKRPGYFSSLCGGRKKTKKSKEKSTEKKKSHKHVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVP--QSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFL 893
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA2_ORYSI (Probable cellulose synthase A catalytic subunit 2 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA2 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29 Identity = 92/279 (32.97%), Postives = 125/279 (44.80%), Query Frame = 3 Query: 3 GIQGPFYQGTGTFHRRDVVYG---------------LC-------------------------------LDQIEH--QGNIVEDE---------LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 668 G+QGP Y GTG R +YG LC L+ IE +G+ +DE L K+FG S F+ S G S+ L EA V CGYE S WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + L SIP L Y LPA C++T +P++ + ++LFL Sbjct: 617 GLQGPVYVGTGCVFNRTALYGYEPPIKQKRPGYFSSLCGGRKKTKKSKEKSTEKKKSHKHVDSSVPVFNLEDIEEGIEGSGFDDEKSLLMSQMSLEKRFGQSSVFVASTLMEYGGVP--QSATPESLLKEAIHVISCGYEDKSDWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLLYCILPAICLLTGKFIIPEISNFASIWFISLFL 893
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.066e-29 Identity = 88/286 (30.77%), Postives = 127/286 (44.41%), Query Frame = 3 Query: 3 GIQGPFYQGTGTFHRRDVVYGL------------------CL----------------------------------DQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPI-LATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLE 695 GIQGP Y GTGT RR +YG CL D+ + I + K FG S FI+S + GG +++ S + EA V CGYE + WG E+G +YG+ ED LTG +H +GWRS YC+P+ AF G A + + Q RWA G +EI S+ P+ G+L+ Q LAY+ + + S+P + Y LPA C++T +P + ++ L LF+ L ++LE Sbjct: 532 GIQGPVYVGTGTVFRRQALYGYSPPSKPRILPQSSSSSCCCLTKKKQPQDPSEIYKDAKREELDAAIFNLGDLDNYDEYDRSMLISQTSFEKTFGLSTVFIESTLM----ENGGVPDSVNPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWRSIYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGCSGGRLKLLQRLAYINTIVYPFTSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLE 813
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 74/199 (37.19%), Postives = 108/199 (54.27%), Query Frame = 3 Query: 99 IVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLE 695 + + L K+FG S FI AA +E ++N L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC+P AF G A + + Q RWA G +EIL S+ PI G+L+ + +AY+ + + + SIP L Y LPA+C+ITN+ +P++ L + LF +LE Sbjct: 700 VSQKRLEKRFGQSPVFI--AATFMEQGGLPSTTNPLTLLKEAIHVISCGYEAKTDWGKEIGWIYGSVTEDILTGFKMHARGWISIYCVPSRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERIAYINTIVYPITSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILE 896
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA8_ORYSJ (Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.310e-29 Identity = 91/280 (32.50%), Postives = 124/280 (44.29%), Query Frame = 3 Query: 3 GIQGPFYQGTGTFHRRDVVYG----------------LC-------------------------------LDQIEH--QGNIVEDE---------LLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFL 668 GIQGP Y GTG R +YG LC L+ IE +G +DE L K+FG S F+ S G S+ L EA V CGYE + WG E+G +YG+ ED LTG +H++GWRS YC+P AF G A + + Q RWA G +EILFS+ PI G+L+F + AY+ + L SIP L Y LPA C++T +P++ + ++LF+ Sbjct: 624 GIQGPVYVGTGCVFNRTALYGYEPPIKQKKKGSFLSSLCGGRKKASKSKKKSSDKKKSNKHVDSAVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAAFVASTLMEYGGVP--QSATPESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKFLERFAYINTTIYPLTSIPLLIYCVLPAICLLTGKFIIPEISNFASIWFISLFI 901
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA6_ARATH (Cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Arabidopsis thaliana GN=CESA6 PE=1 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29 Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 3 Query: 81 IEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS--LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLE 695 +E ++ +L KKFG S F+ SA + GG + N S + L EA +V CGYE + WG E+G +YG+ ED LTG +HS GWRS YC P AF G A + + Q RWA G +EI S+ PI G L++ + L+Y+ + + S+P + Y +LPA C++T +P++ ++ +ALF + +LE Sbjct: 712 VEQSTEAMQMKLEKKFGQSPVFVASARM----ENGGMARNASPACLLKEAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHSHGWRSVYCTPKLAAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERLSYINSVVYPWTSLPLIVYCSLPAICLLTGKFIVPEISNYASILFMALFSSIAITGILE 914
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSJ (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 74/209 (35.41%), Postives = 110/209 (52.63%), Query Frame = 3 Query: 39 FHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALF 665 F+ D+ G+ + E + + L K+FG S FI S T G S+N + L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC+P F G A + + Q RWA G +EIL S+ PI G+L+ + LAY+ + + + SIP + Y LPA C++TN +P++ + + LF Sbjct: 688 FNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPP--STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLF 894
BLAST of FC931564 vs. ExPASy Swiss-Prot
Match: CESA1_ORYSI (Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.183e-28 Identity = 74/209 (35.41%), Postives = 110/209 (52.63%), Query Frame = 3 Query: 39 FHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALF 665 F+ D+ G+ + E + + L K+FG S FI S T G S+N + L EA V CGYE + WG E+G +YG+ ED LTG +H++GW S YC+P F G A + + Q RWA G +EIL S+ PI G+L+ + LAY+ + + + SIP + Y LPA C++TN +P++ + + LF Sbjct: 688 FNMEDIEEGIEGYEDERSVLMSQKRLEKRFGQSPIFIASTFMTQGGIPP--STNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPCFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLIAYCVLPAICLLTNKFIIPEISNYAGMFFILLF 894 The following BLAST results are available for this feature:
BLAST of FC931564 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931564 ID=FC931564; Name=FC931564; organism=Citrus clementina; type=EST; length=706bpback to top |