FC931636

Overview
NameFC931636
Unique NameFC931636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana GN=ERF095 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 32/61 (52.46%), Postives = 41/61 (67.21%), Query Frame = 1
Query:  289 QYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 468
            +YRG+R+RPWGK+AAEIRD  + G RVWLGTFNT              +RG++A +NFP E
Sbjct:   13 KYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHE 73          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF11_ARATH (Ethylene-responsive transcription factor ERF011 OS=Arabidopsis thaliana GN=ERF011 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1
Query:  253 QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQK 516
            +A  + + KR+  ++GIR R WGKW AEIR+P K  R+WLG+++T              +RG  A +NFP+  P  + +    A  +K
Sbjct:    8 KADVAVKMKRERPFKGIRMRKWGKWVAEIREPNKRSRLWLGSYSTPEAAARAYDTAVFYLRGPTATLNFPELLPCTSAEDMSAATIRK 95          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF18_ARATH (Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana GN=ERF018 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 32/88 (36.36%), Postives = 51/88 (57.95%), Query Frame = 1
Query:  247 VEQAKKSTERKR----KNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSV 498
            V+QA K  E+KR    +++Y+G+R+R WGKW +EIR P    R+WLG+++T              +RG  A  NFP+  P+ + + S+
Sbjct:    2 VKQAMKEEEKKRNTAMQSKYKGVRKRKWGKWVSEIRLPHSRERIWLGSYDTPEKAARAFDAAQFCLRGGDANFNFPNNPPSISVEKSL 89          
BLAST of FC931636 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query:  259 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTK-GVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE 468
            K  + RK +  YRG+R+RPWGK+AAEIRD T+ G+RVWLGTF +              +RG  A +NF  E
Sbjct:   71 KSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141          
The following BLAST results are available for this feature:
BLAST of FC931636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
ERF95_ARATH5.342e-1152.46Ethylene-responsive transcription factor ERF095 OS... [more]
ERF11_ARATH5.342e-1135.23Ethylene-responsive transcription factor ERF011 OS... [more]
ERF18_ARATH6.977e-1136.36Ethylene-responsive transcription factor ERF018 OS... [more]
ERF92_ARATH9.112e-1146.48Ethylene-responsive transcription factor 1B OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC34107D03EF PostHarvP1 Citrus clementina cDNA clone C34107D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931636 ID=FC931636; Name=FC931636; organism=Citrus clementina; type=EST; length=734bp
GACTGAAGAATCCAAAACTCTCTCAAGCCAAAGAAGCTGGAGCTGAAGAG
GTCATCCAACAAGAAGTACTCAAAGCCGATCGTCGACGATGACTTCGAGG
CTGATTTCCAAGGATTCAAGGACGATGAAGAAGAGTCTGACATTGATGGT
GACGTGGACGTTGATGCCGACTTGATGATGGCTGATATTAAGCCTTCCAC
TTTCTCAGCTGGTCGCAAGTCTCATGGATCTACAGCCGTGAAGCACGTTG
AACAAGCTAAAAAATCCACAGAAAGAAAGAGGAAGAATCAATATAGGGGA
ATTAGGCAGCGTCCATGGGGAAAATGGGCTGCTGAGATCCGTGACCCCAC
AAAAGGGGTTCGTGTCTGGCTAGGAACTTTCAATACCGCTGAAGAAGCCG
CTAGGGCTTATGATGCCGAGGCACGGAGGATCCGTGGGAAGAAAGCTAAG
GTTAACTTTCCAGATGAAACTCCTGCTGCTGCTCCAAAGAGCTCAGTGAA
GGCAAACTCTCAGAAATCCGTTCCCAAAGCTTGCCTAAGCCCCGTGCAGC
CAAGTTTGAACCAAAACTTCAATTACTTGAACAACTCCGATCAGGATTAC
TACAACAATGTGAGTATTCTGGAGGAGAAACCACAGTGAATCAGTATGGA
TATATGGGCTCCTTCCCTGATGATGGAGAACTAGGATTCAACCCTTTGTG
CCACAGCTGATGATACTCCTGTGTACTTCACTCT
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