FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_SORBI (Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 3.930e-76
Identity = 129/181 (71.27%), Postives = 146/181 (80.66%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EE+RKAQRA G AT+LAI TATP NCV QADYPDYYF IT SEHMT            S IRKR+M LTEE L  NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+++GL P V R+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNR 186          

HSP 2 Score: 40.817 bits (94), Expect = 3.930e-76
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  186 RGARVLVVCSEITAVTFRGPSESHLD 211          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 3.930e-76
Identity = 129/181 (71.27%), Postives = 146/181 (80.66%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EE+RKAQRA G AT+LAI TATP NCV QADYPDYYF IT SEHMT            S IRKR+M LTEE L  NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+++GL P V R+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNR 186          

HSP 2 Score: 40.817 bits (94), Expect = 3.930e-76
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  186 RGARVLVVCSEITAVTFRGPSESHLD 211          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_ANTMA (Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 3.931e-76
Identity = 129/181 (71.27%), Postives = 149/181 (82.32%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            MVT+EE+R+AQRAEG AT+LAI TATP NCV Q+ YPDYYF ITNSEHMT            S I++R+M LTEEILK NP MC +M  SLDARQDI +VEVP+LGKEAA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LR+AKDLAENN
Sbjct:    1 MVTVEEVRRAQRAEGPATVLAIGTATPANCVDQSTYPDYYFRITNSEHMTELKEKFKRMCDKSNIKRRYMHLTEEILKENPAMCEYMAPSLDARQDIVVVEVPRLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENN 181          

HSP 2 Score: 40.4318 bits (93), Expect = 3.931e-76
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  183 GARVLVVCSEITAVTFRGPADTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 5.126e-76
Identity = 129/181 (71.27%), Postives = 146/181 (80.66%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            VT+EE+RKAQRA G AT+LAI TATP NCV QADYPDYYF IT SEHMT            S IRKR+M LTEE L  NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQPKS ITHL+FCT++GVDMPGADYQLT+++GL P V R+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 VTVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAHKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNR 186          

HSP 2 Score: 40.817 bits (94), Expect = 5.126e-76
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  186 RGARVLVVCSEITAVTFRGPSESHLD 211          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_HORVU (Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.126e-76
Identity = 128/181 (70.72%), Postives = 148/181 (81.77%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            +T+EE+R AQRAEG AT+LAI TATP NCV QADYPDYYF IT S+HM             S IRKR+M LTEEIL+ NPNMC +M  SLDARQDI +VEVPKLGK AA KAIKEWGQP+S ITHL+FCT++GVDMPGADYQLT+++GL P VKR+M+YQQGC+AG T+LRLAKDLAENNR
Sbjct:    5 MTVEEVRNAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILEENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNR 185          

HSP 2 Score: 38.891 bits (89), Expect = 5.126e-76
Identity = 17/26 (65.38%), Postives = 21/26 (80.77%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP  +H+D
Sbjct:  185 RGARVLVVCSEITAVTFRGPHESHLD 210          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.127e-76
Identity = 129/182 (70.88%), Postives = 150/182 (82.42%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+ EIR+AQRAEG AT+ AI TATP NCV Q+ YPD+YF ITNS+H T            SMI+KR+M LTEEILK NP++C +M  SLDARQD+ +VEVPKLGKEAATKAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVTVNEIRQAQRAEGPATVFAIGTATPQNCVEQSTYPDFYFRITNSQHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSLCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 5.127e-76
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS7_PICMA (Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.686e-76
Identity = 128/182 (70.33%), Postives = 149/182 (81.87%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M  +E  RKAQRA+G ATILAI TATPPN V Q+ YPDYYF ITNSEHMT            S I+KR+M LT+EILK NPN+C +M  SLDARQD+ +VEVP+LGKEAATKAIKEWGQPKS ITH+IFCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LR+AKDLAENNR
Sbjct:    6 MADLEAFRKAQRADGPATILAIGTATPPNAVDQSTYPDYYFKITNSEHMTELKEKFQRMCDKSAIKKRYMYLTDEILKENPNVCEYMAPSLDARQDMVVVEVPRLGKEAATKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAKDLAENNR 187          

HSP 2 Score: 41.9726 bits (97), Expect = 6.686e-76
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  187 RGARVLVVCSEITAVTFRGPSDTHLD 212          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 264.618 bits (675), Expect = 8.720e-76
Identity = 130/181 (71.82%), Postives = 144/181 (79.56%), Query Frame = 2
Query:   77 VTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            V M+ IR AQRAEG ATILAI TATP NCV QADYPDYYF IT SEHM             SMIRKR+M +TEE LK NPNMC +M  SLD RQD+ +VEVPKLGKEAA KAIKEWG PKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    5 VDMKAIRDAQRAEGPATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYMHITEEYLKQNPNMCAYMAPSLDVRQDLVVVEVPKLGKEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNK 185          

HSP 2 Score: 40.817 bits (94), Expect = 8.720e-76
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGP+ TH+D
Sbjct:  185 KGARVLVVCSEITAVTFRGPNDTHLD 210          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 8.721e-76
Identity = 129/182 (70.88%), Postives = 150/182 (82.42%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TATP NCV Q+ YPD+YF ITNSEH T            SMI++R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182          

HSP 2 Score: 41.9726 bits (97), Expect = 8.721e-76
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207          
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.722e-76
Identity = 130/188 (69.15%), Postives = 150/188 (79.79%), Query Frame = 2
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLL 637
            MVT+ E+RKAQRAEG ATILAI TATP NCV Q+ YPDYYF ITNSEH T            SMI KR+M LTEEILK NP+ C +M  SLDARQDI++VEVPKLGKEAA  AIK WGQPKS ITH++FCT++GVDMPGADYQLT+L+GL P VKR+M+YQQGC+AG T+LRLAKDLAENN+    L+
Sbjct:    1 MVTVGEVRKAQRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLI 188          

HSP 2 Score: 41.5874 bits (96), Expect = 8.722e-76
Identity = 17/26 (65.38%), Postives = 22/26 (84.62%), Query Frame = 1
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVL+VCSE T+ TFRGPS  H+D
Sbjct:  182 KGARVLIVCSEITVVTFRGPSEAHLD 207          
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS1_SORBI3.930e-7671.27Chalcone synthase 1 OS=Sorghum bicolor GN=CHS1 PE=... [more]
CHS7_SORBI3.930e-7671.27Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHSY_ANTMA3.931e-7671.27Chalcone synthase OS=Antirrhinum majus GN=CHS PE=3... [more]
CHS5_SORBI5.126e-7671.27Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS1_HORVU5.126e-7670.72Chalcone synthase 1 OS=Hordeum vulgare GN=CHS1 PE=... [more]
CHSA_PEA5.127e-7670.88Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS7_PICMA6.686e-7670.33Chalcone synthase 7 OS=Picea mariana GN=CSF7 PE=2 ... [more]
CHS1_GERHY8.720e-7671.82Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHS6_PEA8.721e-7670.88Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHS3_IPOBA8.722e-7669.15Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]

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Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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