FC931653

Overview
NameFC931653
Unique NameFC931653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 4.686e-74
Identity = 125/178 (70.22%), Postives = 142/178 (79.78%), Query Frame = 2 
Query:   83 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            MEEIR+AQRAEG A +LAI T+TPPN + QADYPDYYF IT SEH+T            SMI+KR+M LTEEILK NPN+C  M  SLDARQDI + EVPKL KEAA +AIKEWG PKS ITHLIFCT++G+DMPGADYQLTRL+GL P V R M+YQQGC+AG T+LRLAKDLAENN
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENN 182

HSP 2 Score: 40.4318 bits (93), Expect = 4.686e-74
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1 
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  184 GARVLVVCSEITAVTFRGPSESHLD 208
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 4.686e-74
Identity = 125/178 (70.22%), Postives = 142/178 (79.78%), Query Frame = 2 
Query:   83 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            MEEIR+AQRAEG A +LAI T+TPPN + QADYPDYYF IT SEH+T            SMI+KR+M LTEEILK NPN+C  M  SLDARQDI + EVPKL KEAA +AIKEWG PKS ITHLIFCT++G+DMPGADYQLTRL+GL P V R M+YQQGC+AG T+LRLAKDLAENN
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENN 182

HSP 2 Score: 40.4318 bits (93), Expect = 4.686e-74
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1 
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  184 GARVLVVCSEITAVTFRGPSESHLD 208
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 4.686e-74
Identity = 125/178 (70.22%), Postives = 142/178 (79.78%), Query Frame = 2 
Query:   83 MEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENN 616
            MEEIR+AQRAEG A +LAI T+TPPN + QADYPDYYF IT SEH+T            SMI+KR+M LTEEILK NPN+C  M  SLDARQDI + EVPKL KEAA +AIKEWG PKS ITHLIFCT++G+DMPGADYQLTRL+GL P V R M+YQQGC+AG T+LRLAKDLAENN
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENN 182

HSP 2 Score: 40.4318 bits (93), Expect = 4.686e-74
Identity = 18/25 (72.00%), Postives = 21/25 (84.00%), Query Frame = 1 
Query:  619 GSRVLVVCSENTIPTFRGPSYTHID 693
            G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  184 GARVLVVCSEITAVTFRGPSESHLD 208
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 4.687e-74
Identity = 126/182 (69.23%), Postives = 144/182 (79.12%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MVT+EE RKAQRAEG ATILAI T+TP NCV Q+ YPDYYF ITNSEH T            SMI+KR+M LTEEILK NPNMC +M  SLDARQDI +VEVPKLGK    KAIKEWGQPKS ITHL+FCT++GVDMP  DYQL +L+ + P VKR+M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKRGTQKAIKEWGQPKSKITHLVFCTTSGVDMPACDYQLAKLLPVRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 40.817 bits (94), Expect = 4.687e-74
Identity = 18/26 (69.23%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS +H+D
Sbjct:  182 KGARVLVVCSEITAVTFRGPSESHLD 207
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.687e-74
Identity = 128/182 (70.33%), Postives = 147/182 (80.77%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA PPN V QA YPD+YF ITNSEH              SMI+ R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 41.9726 bits (97), Expect = 4.687e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.972e-74
Identity = 125/182 (68.68%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIR+AQRAEG ATI+AI TA P NCV Q+ YPD+YF ITNSEH              SMI++R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 41.9726 bits (97), Expect = 7.972e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.972e-74
Identity = 128/182 (70.33%), Postives = 147/182 (80.77%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIRKAQRAEG ATILAI TA P N V QA YPD+YF ITNSEH T            SMI+ R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 41.9726 bits (97), Expect = 7.972e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.972e-74
Identity = 125/182 (68.68%), Postives = 148/182 (81.32%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            MV++ EIR+AQRAEG ATI+AI TA P NCV Q+ YPD+YF ITNSEH              SMI++R+M LTEEILK NP++C +M  SLDARQD+ +VEVP+LGKEAA KAIKEWGQPKS ITHLIFCT++GVDMPGADYQLT+L+GL P VKR M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 41.9726 bits (97), Expect = 7.972e-74
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T  TFRGPS TH+D
Sbjct:  182 KGARVLVVCSEVTAVTFRGPSDTHLD 207
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.040e-73
Identity = 126/182 (69.23%), Postives = 150/182 (82.42%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNR 619
            M ++EEIR+AQRA+G ATILAI TATPPN + QADYPDYYF +T SEHMT            SMI+KR+M LTEEILK NPN+C +MG+SLD RQD+ + EVP+LGKEAA KAIKEWGQPKS ITH+I CT++GVDMPGADYQLT+L+GL P V+R M+YQQGC+AG T+LRLAKDLAENN+
Sbjct:    1 MASIEEIRQAQRADGPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYMYLTEEILKENPNLCEYMGSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNK 182

HSP 2 Score: 32.7278 bits (73), Expect = 1.040e-73
Identity = 15/26 (57.69%), Postives = 19/26 (73.08%), Query Frame = 1 
Query:  616 QGSRVLVVCSENTIPTFRGPSYTHID 693
            +G+RVLVVCSE T   FRGP+   +D
Sbjct:  182 KGARVLVVCSEITAICFRGPTEAALD 207
[Close]
BLAST of FC931653 vs. ExPASy Swiss-Prot
Match: ACS2_RUTGR (Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.177e-73
Identity = 134/196 (68.37%), Postives = 155/196 (79.08%), Query Frame = 2 
Query:   74 MVTMEEIRKAQRAEGLATILAISTATPPNCVIQADYPDYYFGITNSEHMTXXXXXXXXXXXXSMIRKRHMCLTEEILKANPNMCLHMGTSLDARQDISLVEVPKLGKEAATKAIKEWGQPKSNITHLIFCTSAGVDMPGADYQLTRLIGLNPDVKRMMIYQQGCYAGATILRLAKDLAENNRALVFLLFVLRTQSP 661
            M +++E+RKAQ++EG A ILAI TATP N  IQADYPDYYF IT SEHMT            SMIRKRHMC ++E LKANP +C HMG SL+ARQDI++VE P++GKEAA KAIKEWG PKS+ITHLIFCTSAGVDMPGADYQLTR++GLNP VKRMMIYQQGCYAG T+LRLAKDLAENN+    L+      +P
Sbjct:    1 MESLKEMRKAQKSEGPAAILAIGTATPDNVYIQADYPDYYFKITKSEHMTELKDKFKTLCEKSMIRKRHMCFSQEFLKANPEVCKHMGKSLNARQDIAVVETPRIGKEAAVKAIKEWGHPKSSITHLIFCTSAGVDMPGADYQLTRMLGLNPSVKRMMIYQQGCYAGGTVLRLAKDLAENNKGSRVLVVCSELTAP 196
The following BLAST results are available for this feature:
BLAST of FC931653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS8_BROFI4.686e-7470.22Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI4.686e-7470.22Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI4.686e-7470.22Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHS1_SOLLC4.687e-7469.23Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHS1_TRISU4.687e-7470.33Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS9_MEDSA7.972e-7468.68Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS6_TRISU7.972e-7470.33Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHS3_MEDSA7.972e-7468.68Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHSY_DIAMO1.040e-7369.23Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
ACS2_RUTGR1.177e-7368.37Acridone synthase 2 OS=Ruta graveolens GN=ACS2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34107E08EF PostHarvP1 Citrus clementina cDNA clone C34107E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931653 ID=FC931653; Name=FC931653; organism=Citrus clementina; type=EST; length=695bp
ACAATCGCGAAAGCGCAAACTTATTAATTAACTAAGTTTAAGTACTGTTT
TGGAAGCAATCTGACGATCAGAGATGGTAACAATGGAGGAGATTAGAAAG
GCTCAGCGAGCCGAGGGCCTGGCGACCATCCTCGCCATCAGCACGGCAAC
GCCGCCCAATTGTGTCATCCAAGCTGATTATCCTGACTATTACTTCGGGA
TCACCAACAGCGAGCACATGACTGAGCTCAAAGAGAAGTTCAAGCTCTTG
TGTGAGAAGTCGATGATAAGAAAGCGTCACATGTGCTTAACAGAAGAGAT
TTTAAAAGCAAACCCTAATATGTGCTTACACATGGGGACATCACTCGATG
CGCGCCAGGACATTTCTCTTGTTGAAGTACCAAAGCTTGGCAAAGAGGCG
GCAACCAAAGCTATCAAAGAATGGGGACAGCCCAAATCCAATATCACCCA
TCTCATTTTCTGCACATCTGCAGGCGTCGACATGCCTGGCGCTGACTATC
AGCTCACAAGACTCATCGGCCTCAACCCGGATGTTAAGCGTATGATGATA
TATCAACAAGGGTGTTATGCTGGCGCCACCATCCTTCGTCTTGCTAAAGA
TTTGGCTGAAAACAACAGGGCTCTCGTGTTCTTGTTGTTTGTTCTGAGAA
CACAATCCCCACTTTCCGTGGGCCGTCTTATACCCATATTGATTC
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