FC931765

Overview
NameFC931765
Unique NameFC931765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9416 contig Ccv1_Contig9416:505..1221. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC931765 vs. ExPASy Swiss-Prot
Match: ACOC_BACSU (Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system OS=Bacillus subtilis GN=acoC PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.035e-11
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 1 
Query:  313 KERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSEYKDAFLEKHGVKLGLMSGFVKAAVSGLQNQPIINAVXXXXXXXXXXXXXXXXAVGTSKGLVVPVIRNAE*MNFADIEKEIYTLRKKA 714
            +++ + +P+T +RK +A R+++S    A LT   + D+T L  L+ +      E++G KL +     +AAV  LQ  P++N+                 AV    GLVVPVIR+AE ++  ++ + I    KKA
Sbjct:  168 EQKAQEIPVTGMRKVIAARMQESLANSAQLTITMKADITKLATLQKQLSPTAEERYGTKLTITHFVSRAAVLALQAHPVLNSFYQNERIITHPHVHLGMAVALENGLVVPVIRHAEKLSLIELAQSISENAKKA 301
The following BLAST results are available for this feature:
BLAST of FC931765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ACOC_BACSU1.035e-1130.60Dihydrolipoyllysine-residue acetyltransferase comp... [more]

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Properties
Property NameValue
Genbank descriptionC34201A01EF PostHarveN Citrus clementina cDNA clone C34201A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931765 ID=FC931765; Name=FC931765; organism=Citrus clementina; type=EST; length=717bp
CAAATTGAAACCGATAAGGTAACGATTGATGTTGCAAGTCCAGAAGCAGG
TGTTATCAAAGAGCTTGTAGCCAAAGAAGGGGAGACTGTGGAACCAGGTA
CCAAGATTGCTGTGATTTCAAAGTCTGGTGAAGGTGTAGCTCATGTAGCT
CCCTCAGAAAAAATACCAGAGAAAGCTGCTCCTAAGCCACCTTCTGCTGA
AAAAGCAAAGGAGGACAAGCCGCAGCCTAAAGTTGAAACTGTTTCTGAGA
AGCCTAAAGCACCCTCTCCACCACCTCCTAAGCGCACTGCTACTGAGCCT
CAGCTTCCCCCAAAGGAAAGGGAAAGACGAGTTCCTATGACAAGACTACG
TAAACGAGTTGCAACACGATTGAAAGACTCCCAAAATACATTTGCAATGT
TGACTACATTCAATGAAGTTGATATGACTAATTTGATGAAGCTCCGTTCT
GAGTACAAGGATGCTTTTCTTGAAAAGCATGGAGTCAAATTGGGACTTAT
GTCAGGTTTTGTGAAAGCTGCTGTTAGTGGGCTCCAGAATCAGCCTATTA
TAAATGCAGTTATTGATGGGGGTGATATCATATATAGAGATTATATTGAC
ATTAGTATCGCTGTCGGTACTTCAAAGGGCCTGGTGGTTCCAGTAATCCG
CAATGCCGAATAGATGAATTTTGCTGATATCGAAAAAGAGATTTACACCT
TGCGAAAGAAAGCGATG
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