FC931773
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931773 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.699e-23 Identity = 52/167 (31.14%), Postives = 90/167 (53.89%), Query Frame = 1 Query: 253 RLFGRERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHILPGLYEKYEGQI 753 +LF R+R +H++ GGG ADV LWR K +S G++ A W++FE F Y + TL+ W+ + + + + P +PE + E + + RI +N V IA RD + + +L++LS++GS +F TL + +++++ +P YE+YE I Sbjct: 7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173
BLAST of FC931773 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23 Identity = 56/163 (34.36%), Postives = 82/163 (50.31%), Query Frame = 1 Query: 268 ERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHILPGLYEKYEGQID 756 E VHQ G AD+ +W+N++ +LG T +W LFE Y V +T WA + + P +P + + EE VA A R+ +N AV R I GR+ K LW +S VG++ NFLT+ Y+ +VL ++P LYE+Y+ ID Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLID 164
BLAST of FC931773 vs. ExPASy Swiss-Prot
Match: RTNLN_ARATH (Reticulon-like protein B14 OS=Arabidopsis thaliana GN=RTNLB14 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.945e-23 Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 265 RERPVHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWA--NAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHILPGLYEKYEGQI 753 R R ++ GGG+ AD+ W+NKK S +LG T IW LFE+ EY +T +C W+ + I+ PP I ++ + E + + + ++N L I+SG+D + +A+ +LW+LSVVG++ + LTL YI V L +P LYE+YE ++ Sbjct: 18 RRRSLYHNLGGGRFADIMFWKNKKESGTILGVFTLIWFLFEVVEYPFITFLCQILLLFIFIFLIWSYIGSSQLIQSKPPSINDLRISESNWRFLFN----KINWFIIKLYDISSGKDFRLLFLAVVSLWILSVVGNYFSSLTLLYIVFVGLETIPMLYEQYEEEL 178
BLAST of FC931773 vs. ExPASy Swiss-Prot
Match: RTNLK_ARATH (Reticulon-like protein B11 OS=Arabidopsis thaliana GN=RTNLB11 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21 Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 277 VHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWANAHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHILPGLYEKYEGQID 756 VHQ G G AD+ LWRN+ + +L +T W LFE Y+LL+ V + WA + T + + P +P + +PEE + A R+ +N+ ++ I R+ L LW +S VG+ N LTL YI ++L P +YEKY+ ID Sbjct: 13 VHQSLGAGSVADLLLWRNRTGAVILLISSTGFWFLFERAGYNLLSFVSNVLLLLVAIFFLWAKSATVLNRPLPPVPNMEIPEEFANKAADDLRVWINYVLSIASDITIARNPIRLLQVSLVLWAISYVGTLINSLTLVYIGVLLSLSFPIVYEKYQDHID 172
BLAST of FC931773 vs. ExPASy Swiss-Prot
Match: RTNLO_ARATH (Reticulon-like protein B15 OS=Arabidopsis thaliana GN=RTNLB15 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 8.454e-15 Identity = 51/161 (31.68%), Postives = 77/161 (47.83%), Query Frame = 1 Query: 277 VHQVFGGGKPADVFLWRNKKISAGVLGGATAIWVLFELFEYHLLTLVCHTXXXXXXXXXXWAN-AHTFIKKAPPCIPEVHLPEEPFLQVASAFRIELNHAFAVLRSIASGRDLKSFLMAIAALWVLSVVGSWCNFLTLFYIALVLLHILPGLYEKYEGQID 756 V Q+ G G AD+ LW++K S L AT W L E E L+ L+C WA F + PP E++ P+ P + S L +L IA G+D K+FL I + ++ +GS+ + LT+ YI LV +P +Y +++ ID Sbjct: 4 VDQILGDGAVADLCLWKDKINSGITLVMATLFWFLLEFMEARLVPLLCSILLLLMLILFLWAKFGEVFFTRRPPTPEELNQPDSPLKALFSMMEGHL----LMLYEIAYGKDNKTFLKTILYVAIIYNIGSYISLLTILYICLVCSMTIPVVYMQFQELID 160 The following BLAST results are available for this feature:
BLAST of FC931773 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931773 ID=FC931773; Name=FC931773; organism=Citrus clementina; type=EST; length=758bpback to top |