FC931775

Overview
NameFC931775
Unique NameFC931775
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_XANC8 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.701e-40
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 592
            +V K+    ++K+ D+S AD+GR E+++AE EMPGLM+ R +   ++P K  +ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDH              W+GETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVAKTVPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_XANC5 (Adenosylhomocysteinase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.222e-40
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 592
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   ++P K  +ITGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              W+GETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_XANAC (Adenosylhomocysteinase OS=Xanthomonas axonopodis pv. citri GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.222e-40
Identity = 83/155 (53.55%), Postives = 106/155 (68.39%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 592
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   ++P K  +ITGSLHMTIQTAVLIETL  +GA+VRW SCNIFSTQDH              W+GETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHTDYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTKPLKDVRITGSLHMTIQTAVLIETLKDIGADVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_SPHAL (Adenosylhomocysteinase OS=Sphingopyxis alaskensis GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.902e-40
Identity = 90/174 (51.72%), Postives = 109/174 (62.64%), Query Frame = 2
Query:  152 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDW---GPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 664
            +A  R++ V D+  ADFGR EI +AE EMPGLMA RAE+G SQP KGA+ITGSLHMTIQTAVLIETLTALGAEVRW +CNIFSTQ+H               +GE+L +YW    +  DW     G   +LI+DDGGDAT+    G K     E    +P P + +  E Q  L
Sbjct:    5 AADTRDYVVADIGLADFGRKEINIAETEMPGLMALRAEYGASQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWATCNIFSTQNHAAAAIAASGVPVFAVKGESLADYWDYVGRIFDWESDNDGRTANLILDDGGDATMFALWGAK----LEAGETMPPPENEEEVEMQRAL 174          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_RHOBA (Adenosylhomocysteinase OS=Rhodopirellula baltica GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.902e-40
Identity = 87/176 (49.43%), Postives = 109/176 (61.93%), Query Frame = 2
Query:  170 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHE------------------GVKAEEIYEKTGKLPDPASTDN 643
            +KVKD+S AD+GR EIELAE EMPGLMA R+++G  +P KGA+I G LHMTIQTAVLIETL  LGAEV W SCNIFSTQDH              W+G T +E+ WC E+ LD+  G   ++I+DDGGD T ++H+                  GV   E+  K+GKL  P+   N
Sbjct:   11 YKVKDISLADYGRKEIELAENEMPGLMALRSKYGAEKPLKGARIAGCLHMTIQTAVLIETLVELGAEVTWSSCNIFSTQDHAAAAIAAAGIPVYAWKGMTEEEFDWCIEQTLDFPSGEKLNMILDDGGDLTAMVHDRFPELLDNIYGISEETTAGVHRLEVLNKSGKLRVPSINVN 186          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_MARMM (Adenosylhomocysteinase OS=Maricaulis maris (strain MCS10) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.790e-40
Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 2
Query:  155 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 592
            A+ + + VKD+S A +GR+E ++AE+EMPGLMA R E+  SQP KGA+I GSLHMT+QTA+LIETLTALGAEVRW SCNIFSTQDH               +GETL+EYW   +    W  G   ++I+DDGGDAT+ +  G KAE
Sbjct:    5 AADKPYIVKDMSLAKWGRIEFDMAEIEMPGLMALREEYKDSQPLKGARIAGSLHMTVQTAILIETLTALGAEVRWASCNIFSTQDHAAAAIAETGVPVFATKGETLEEYWDYADAIFHWPDGETANMILDDGGDATMYLILGEKAE 150          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.950e-40
Identity = 83/156 (53.21%), Postives = 103/156 (66.03%), Query Frame = 2
Query:  128 TMALSVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 595
            T A S  +     +F V D++ ADFGR E+ +AE EMPGLM+ R ++G  +P +GA+I GSLHMTIQT VLIETL ALGA+VRW SCNIFSTQDH               +GETL EYW  T   L+W    GP++I+DDGGDAT L+  G KAE+
Sbjct:    3 TAAASTSQVVGDSDFVVADITLADFGRKELAIAEKEMPGLMSLRDKYGQEKPLQGARIAGSLHMTIQTGVLIETLVALGAQVRWASCNIFSTQDHAAAAIAKAGVPVFAKKGETLSEYWSFTHSILEWSGEQGPNMILDDGGDATGLVILGSKAEK 158          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_XANOP (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 592
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   + P K  +ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDH              W+GETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHADYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_XANOM (Adenosylhomocysteinase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ahcY PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 83/155 (53.55%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDW----GPGGGPDLIVDDGGDATLLIHEGVKAE 592
            +V K     ++K+ D+S AD+GR E+++AE EMPGLM+ R +   + P K  +ITGSLHMTIQTAVLIETL  +GA VRW SCNIFSTQDH              W+GETL+EYW CT  AL +    G   GP+L+VDDGGD TLLIH+G + E
Sbjct:    3 AVTKITPHADYKIADISLADWGRKELDIAEHEMPGLMSIRRKHAQTTPLKDVRITGSLHMTIQTAVLIETLKDIGANVRWASCNIFSTQDHAAAAIAATGTPVFAWKGETLEEYWDCTLDALTFTLPDGTLTGPELVVDDGGDVTLLIHKGYELE 157          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_RHOSH (Adenosylhomocysteinase OS=Rhodobacter sphaeroides GN=ahcY PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.443e-40
Identity = 84/142 (59.15%), Postives = 101/142 (71.13%), Query Frame = 2
Query:  167 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 592
            +F VKDLS ADFGR E+++AE EMPGLMA R EFG S+P KGA+I GSLHMT+QTAVLIETL ALGA+VRW SCNIFSTQDH               +GETL++YW  T+K   +   G  ++I+DDGGDATL I  G + E
Sbjct:    3 DFIVKDLSLADFGRKELDIAETEMPGLMALREEFGASKPLKGARIAGSLHMTVQTAVLIETLVALGADVRWASCNIFSTQDHAAAAIAASGVPVFAIKGETLEDYWAYTDKIFQFA-DGTCNMILDDGGDATLYILLGARVE 143          
The following BLAST results are available for this feature:
BLAST of FC931775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_XANC81.701e-4053.55Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANC52.222e-4053.55Adenosylhomocysteinase OS=Xanthomonas campestris p... [more]
SAHH_XANAC2.222e-4053.55Adenosylhomocysteinase OS=Xanthomonas axonopodis p... [more]
SAHH_SPHAL2.902e-4051.72Adenosylhomocysteinase OS=Sphingopyxis alaskensis ... [more]
SAHH_RHOBA2.902e-4049.43Adenosylhomocysteinase OS=Rhodopirellula baltica G... [more]
SAHH_MARMM3.790e-4055.48Adenosylhomocysteinase OS=Maricaulis maris (strain... [more]
SAHH_PROMA4.950e-4053.21Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_XANOP6.465e-4053.55Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_XANOM6.465e-4053.55Adenosylhomocysteinase OS=Xanthomonas oryzae pv. o... [more]
SAHH_RHOSH8.443e-4059.15Adenosylhomocysteinase OS=Rhodobacter sphaeroides ... [more]

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Properties
Property NameValue
Genbank descriptionC34201A11EF PostHarveN Citrus clementina cDNA clone C34201A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931775 ID=FC931775; Name=FC931775; organism=Citrus clementina; type=EST; length=693bp
GTCGCTCACACCCACTCTCTCTCTCTCTCGCTTGTACAATCATTCACTTT
GTTTGGTTAGTTTCCAAAGAGAGAGTAGATTGCCCTCTCTTCCTTCTTTC
TTGTAGATCTATCAATTCTATTAATCAACCATGGCTTTGTCCGTCGAGAA
ATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACT
TCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATG
GCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCTTTCAAAGGAGCCAAGAT
CACCGGTTCACTCCACATGACCATCCAGACGGCCGTCCTCATCGAGACGC
TCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCA
ACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTT
TGCCTGGGAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAG
CCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGT
GGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTA
CGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGT
TTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGA
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