FC931775

Overview
NameFC931775
Unique NameFC931775
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEU2 (Adenosylhomocysteinase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ahcY PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33
Identity = 76/147 (51.70%), Postives = 93/147 (63.27%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 577
            +V   A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    3 AVMTPAEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAGDQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSESM (Adenosylhomocysteinase OS=Pseudomonas syringae pv. tomato GN=ahcY PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33
Identity = 75/142 (52.82%), Postives = 91/142 (64.08%), Query Frame = 2
Query:  155 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 577
            A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++I+DDGGD T +IH+
Sbjct:    8 AEFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYAAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIAVYAWKGETEEEYEWCIEQTILKDGQPWDANMILDDGGDLTEIIHK 149          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPF (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33
Identity = 75/142 (52.82%), Postives = 91/142 (64.08%), Query Frame = 2
Query:  155 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 577
            A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    8 ADFNDYKVADISLAAWGRRETIIAESEMPALMGLRRKYASEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEF5 (Adenosylhomocysteinase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ahcY PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33
Identity = 76/147 (51.70%), Postives = 93/147 (63.27%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 577
            +V   A   ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:    3 AVNTPAGFTDYKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGKPWDANMILDDGGDLTQLLHD 149          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_HUMAN (Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=1 SV=4)

HSP 1 Score: 142.895 bits (359), Expect = 1.542e-33
Identity = 71/135 (52.59%), Postives = 90/135 (66.67%), Query Frame = 2
Query:  170 FKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIH 574
            +KV D+  A +GR  +++AE EMPGLM  R  +  S+P KGA+I G LHMT++TAVLIETL  LGAEV+W SCNIFSTQDH              W+GET +EY WC E+ L +   G  ++I+DDGGD T LIH
Sbjct:    7 YKVADIGLAAWGRKALDIAENEMPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIPVYAWKGETDEEYLWCIEQTL-YFKDGPLNMILDDGGDLTNLIH 140          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEPG (Adenosylhomocysteinase OS=Pseudomonas putida (strain GB-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 2
Query:  167 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 577
            ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:   12 DYKVADISLAAWGRRETIIAESEMPALMGLRRKYLTEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEP1 (Adenosylhomocysteinase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ahcY PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.487e-33
Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 2
Query:  167 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHE 577
            ++KV D+S A +GR E  +AE EMP LM  R ++   QP KGAKI G +HMTIQTAVLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++I+DDGGD T L+H+
Sbjct:   12 DYKVADISLAAWGRRETIIAESEMPALMGLRRKYLAEQPLKGAKILGCIHMTIQTAVLIETLVALGAEVRWSSCNIFSTQDQAAASIAAAGIPVFAWKGETEEEYEWCLEQTILKDGQPWDANMILDDGGDLTELLHK 149          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAE (Adenosylhomocysteinase OS=Pseudomonas aeruginosa GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33
Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 637
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++++DDGGD T ++H+  K  ++ E+   + +  +T
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK--KYPQMLERIHGITEETTT 167          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEAB (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33
Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 637
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++++DDGGD T ++H+  K  ++ E+   + +  +T
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK--KYPQMLERIHGITEETTT 167          
BLAST of FC931775 vs. ExPASy Swiss-Prot
Match: SAHH_PSEA8 (Adenosylhomocysteinase OS=Pseudomonas aeruginosa (strain LESB58) GN=ahcY PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33
Identity = 75/167 (44.91%), Postives = 102/167 (61.08%), Query Frame = 2
Query:  140 SVEKSASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWEGETLQEYWWCTEKA-LDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPAST 637
            +V   A   ++KV D++ A +GR E+ +AE EMP LM  R ++   QP KGAKI G +HMTIQT VLIETL ALGAEVRW SCNIFSTQD               W+GET +EY WC E+  L  G     ++++DDGGD T ++H+  K  ++ E+   + +  +T
Sbjct:    3 AVMTPAGFTDYKVADITLAAWGRRELIIAESEMPALMGLRRKYAGQQPLKGAKILGCIHMTIQTGVLIETLVALGAEVRWSSCNIFSTQDQAAAAIAAAGIPVFAWKGETEEEYEWCIEQTILKDGQPWDANMVLDDGGDLTEILHK--KYPQMLERIHGITEETTT 167          
The following BLAST results are available for this feature:
BLAST of FC931775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_PSEU21.181e-3351.70Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSESM1.181e-3352.82Adenosylhomocysteinase OS=Pseudomonas syringae pv.... [more]
SAHH_PSEPF1.181e-3352.82Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_PSEF51.181e-3351.70Adenosylhomocysteinase OS=Pseudomonas fluorescens ... [more]
SAHH_HUMAN1.542e-3352.59Adenosylhomocysteinase OS=Homo sapiens GN=AHCY PE=... [more]
SAHH_PSEPG4.487e-3353.62Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEP14.487e-3353.62Adenosylhomocysteinase OS=Pseudomonas putida (stra... [more]
SAHH_PSEAE7.654e-3344.91Adenosylhomocysteinase OS=Pseudomonas aeruginosa G... [more]
SAHH_PSEAB7.654e-3344.91Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]
SAHH_PSEA87.654e-3344.91Adenosylhomocysteinase OS=Pseudomonas aeruginosa (... [more]

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Properties
Property NameValue
Genbank descriptionC34201A11EF PostHarveN Citrus clementina cDNA clone C34201A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931775 ID=FC931775; Name=FC931775; organism=Citrus clementina; type=EST; length=693bp
GTCGCTCACACCCACTCTCTCTCTCTCTCGCTTGTACAATCATTCACTTT
GTTTGGTTAGTTTCCAAAGAGAGAGTAGATTGCCCTCTCTTCCTTCTTTC
TTGTAGATCTATCAATTCTATTAATCAACCATGGCTTTGTCCGTCGAGAA
ATCCGCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACT
TCGGCCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATG
GCTTGCCGCGCCGAGTTCGGCCCTTCACAGCCTTTCAAAGGAGCCAAGAT
CACCGGTTCACTCCACATGACCATCCAGACGGCCGTCCTCATCGAGACGC
TCACCGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCA
ACCCAAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTT
TGCCTGGGAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAG
CCCTGGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGT
GGTGACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTA
CGAGAAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGT
TTCAGATTGTTTTGACTATCATTAGAGATGGGTTGAAGGCCGA
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