FC931782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 50 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 598 + + HE+ V ++ + P+ E ++++GS D T+K+W + + ERT GH V +V P G + AS D ++D+ T + + S + Q+ F P + VA S SV +D + +IA L+ P+G KP++ +S+AWS DG + G D I V+ ++ A+ Sbjct: 145 LRDGHEDWVSSICFSPSLEH--PIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINV-ESPINQIAFSPNRFWMCVATERSLSV--YDLESKAVIAELT---PDGAKPSE-------CISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.947e-13 Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 50 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 598 + + HE+ V ++ + P+ E ++++GS D T+K+W + + ERT GH V +V P G + AS D ++D+ T + + S + Q+ F P + VA S SV +D + +IA L+ P+G KP++ +S+AWS DG + G D I V+ ++ A+ Sbjct: 145 LRDGHEDWVSSICFSPSLEH--PIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINV-ESPINQIAFSPNRFWMCVATERSLSV--YDLESKAVIAELT---PDGAKPSE-------CISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.542e-13 Identity = 53/183 (28.96%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 50 VENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAK 598 + + HE+ V ++ + P+ E ++++GS D T+K+W + + ERT GH V +V P G + AS D ++D+ T + + S + Q+ F P + VA S SV +D + +IA L+ P+G KP++ +S+AWS DG + G D I V+ ++ A+ Sbjct: 145 LRDGHEDWVSSICFSPSLEH--PIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGEQLFKINV-ESPINQIGFSPNRFWMCVATERSLSV--YDLESKAVIAELT---PDGAKPSE-------CISIAWSADGNTLYSGHKDNLIRVWSISDAE 312
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: SNR40_PONAB (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii GN=SNRNP40 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.320e-13 Identity = 54/200 (27.00%), Postives = 98/200 (49.00%), Query Frame = 2 Query: 113 PALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK--PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 706 P L+ TGS D TVKLW +T + V++V + + S +D+ ++V+D+ N T+ V + +G+ L ++ +V++WD + P+ +K + + +K +L +WSPDG +IA GS D ++ V+D T + L+ L GH + + + P +P ++ SAS D ++M Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRPF-------APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRSVCVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IIISASSDKRLYM 353
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_DROME (Guanine nucleotide-binding protein subunit beta-like protein OS=Drosophila melanogaster GN=Rack1 PE=2 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.663e-13 Identity = 56/179 (31.28%), Postives = 89/179 (49.72%), Query Frame = 2 Query: 53 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 589 E+ H + V V + P + P ++ G D TVK+W + +L+ + GH + +V P G + S DS ++D++ ++ TLE + + F P L VA G S+K+WD A + L RPE + PT K+ + LS+AWS DG+ + G D TI V+ V+ Sbjct: 145 EDGHTDWVSCVRFSP-NHSNPIIVSCG-WDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSGGKDSKALLWDLNDGKNLYTLE-HNDIINALCFSPNRYWLCVAYG--PSIKIWDLACKKTVEEL---RPEVVSPTSKADQPQ-CLSLAWSTDGQTLFAGYSDNTIRVWQVS 314
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 54/200 (27.00%), Postives = 97/200 (48.50%), Query Frame = 2 Query: 113 PALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK--PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 706 P L+ TGS D TVKLW +T + V++V + + S +D+ ++V+D+ N T+ V + +G+ L ++ +V++WD + P+ +K + + +K +L +WSPDG +IA GS D + V+D T + L+ L GH + + + P +P ++ SAS D ++M Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRPF-------APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEP-IILSASSDKRLYM 354
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: SNR40_HUMAN (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens GN=SNRNP40 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 54/200 (27.00%), Postives = 97/200 (48.50%), Query Frame = 2 Query: 113 PALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLK--PTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHM 706 P L+ TGS D TVKLW +T + V++V + + S +D+ ++V+D+ N T+ V + +G+ L ++ +V++WD + P+ +K + + +K +L +WSPDG +IA GS D + V+D T + L+ L GH + + + P +P ++ SAS D ++M Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYL-LSNAMDNTVRVWDVRPF-------APKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP-IIISASSDKRLYM 353
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 9.660e-13 Identity = 55/217 (25.35%), Postives = 97/217 (44.70%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 H + +VT+ + L+ G+ T+KLW ++ ++ RT TGH +SV HP G AS SLD+ ++++D+ I T + V ++F P G + V+GG VK+WD L+ T+ S + + S+ + P +A GS D T+ +D+ + + VR L ++P VL + + ++ Sbjct: 58 HSSGIDSVTF----DASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWV-VSGGEDNIVKVWDLTAGKLL-------------TEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: Y143_SYNY3 (Uncharacterized WD repeat-containing protein slr0143 OS=Synechocystis sp. (strain PCC 6803) GN=slr0143 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 65/220 (29.55%), Postives = 99/220 (45.00%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 721 H S++ V + P + + T D+TVK+W D L+ T GH V SV+ P G I AS S D VR++ + ++A L V QF P G TL V+ ++LWD NLI +P + V W P+G +A + DGT+ ++ + + L GH V +V++P D + LFS+S + V + G Sbjct: 600 HTGSIYRVDFSPNGK----IFATAGQDQTVKIWDLDGNLLQ-TLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTL-VSVCRDGQIRLWD-LDGNLIRQFGLP-------------EVAFFGVNWHPNGNLLAVAADDGTVRLW-TPQGEIKATLSGHDEFVTRVVFTP-DGKQLFSSSSNGSVIHWSTSG 797
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PF20_CHLRE (Flagellar WD repeat-containing protein Pf20 OS=Chlamydomonas reinhardtii GN=PF20 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.262e-12 Identity = 54/181 (29.83%), Postives = 84/181 (46.41%), Query Frame = 2 Query: 173 MQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDA 715 + L +T GH L V ++A HP+ I +AS D +++ + I E V + F P GT LA +GGG ++VK+WD + T + K+ + SV + G +A GS+D T+ ++D+ K L GH V L + P L +AS D V ++DA Sbjct: 316 LSLNKTFKGHLLSVANLALHPTKPILVTASDDKTWKMWHMPGGDLIMCGEGHKDWVAGVDFHPAGTCLA-SGGGDSAVKIWDFEKQRCVTTFT-------------DHKQAIWSVRFHHLGEVVASGSLDHTVRLWDLPAGKCRMALRGHVDSVNDLAWQPFSSS-LATASSDKTVSVWDA 481 The following BLAST results are available for this feature:
BLAST of FC931782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931782 ID=FC931782; Name=FC931782; organism=Citrus clementina; type=EST; length=731bpback to top |