FC931782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 53/196 (27.04%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 107 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++D+ + V ++F P G LA A +VKLWD +++ P P V V + P+ +A GS D TI +D+ + + + +EG PVRS++++P D L+S D+ Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA-ADDHTVKLWDLTAGKMMSEF----PGHTGP---------VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DGCCLYSGCQDS 253 HSP 2 Score: 70.8626 bits (172), Expect = 8.178e-12 Identity = 54/200 (27.00%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 119 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 718 LL TG D V LW + + TGH V SV + + + S +RV+D++ + TL + + + F P G +A +G ++KLWD R +G + S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P + +L S S D + +D E Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCVFRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLE 219
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 53/196 (27.04%), Postives = 92/196 (46.94%), Query Frame = 2 Query: 107 TRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 T L++ GS ++++W + ++ RT GH + S+ HP G AS S D+ ++++D+ + V ++F P G LA A +VKLWD +++ P P V V + P+ +A GS D TI +D+ + + + +EG PVRS++++P D L+S D+ Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASA-ADDHTVKLWDLTAGKMMSEF----PGHTGP---------VNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFNP-DGCCLYSGCQDS 253 HSP 2 Score: 70.8626 bits (172), Expect = 8.178e-12 Identity = 54/200 (27.00%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 119 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 718 LL TG D V LW + + TGH V SV + + + S +RV+D++ + TL + + + F P G +A +G ++KLWD R +G + S+ V + +SPDG+ +A + D T+ ++D+T K + GH PV + + P + +L S S D + +D E Sbjct: 35 LLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVA-SGSQDTNIKLWDI------------RRKGCVFRYRGHSQA-VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHP-NEYLLASGSSDRTIRFWDLE 219
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 6.262e-12 Identity = 53/200 (26.50%), Postives = 92/200 (46.00%), Query Frame = 2 Query: 125 LTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSE-VWQMQFDPKGTTLA-VAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 718 L+ S D+T++LW + + GH V+SV+ P S S D ++++++ N + S+ V ++F P L V+ G +VK+WD T++L T +V +V SPDG A G DGT+ ++D+ + L+ LE + +LV+SP R A+ + + ++D E Sbjct: 79 LSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSL-------------RTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYSLEAK-ANINALVFSP--NRYWLCAATGSSIRIFDLE 262
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: PRP46_SCHPO (Pre-mRNA-splicing factor prp46 OS=Schizosaccharomyces pombe GN=prp5 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.178e-12 Identity = 62/213 (29.11%), Postives = 85/213 (39.91%), Query Frame = 2 Query: 89 WVPATETRPA--LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAEG 721 WV + P TG+ D T+K+W L+ T TGH V +A P S D V+ +D++TN I S V+ ++ P L V G A ++WD T + L S K V S+A ++ GSMD TI ++D+ K L L H VR+L P D S S D H EG Sbjct: 165 WVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVL-VTAGRDAVARVWDMRTRQNVHVL-------------SGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLHP-DEFTFASGSSDNIKHWKFPEG 362
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 55/199 (27.64%), Postives = 87/199 (43.72%), Query Frame = 2 Query: 98 ATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDT 694 A + L+ TGS+D T KLW + + T GH ++S+ + +G + S D ++DV + + L E+ +QF+ + +A A S K+WD +ATL E VL V ++ G+ IA S DGT VF + L LEGH + + ++ RVL ++ D T Sbjct: 184 AFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATA-SLDKSCKVWDAEGGQCLATLLGHNDE-------------VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKT 368
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: GBLP_BIOGL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Biomphalaria glabrata PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.395e-11 Identity = 49/179 (27.37%), Postives = 86/179 (48.04%), Query Frame = 2 Query: 53 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 589 ++ H + V + P T+ ++++ D VK+W + +L+ + GH V +V P G + AS DS ++D++ + TL+ + + F P L VA G S+K+WD ++ L +PE + T K+ + LS+AWS DG+ + G D I V+ V+ Sbjct: 144 DDCHTDWTSCVRFSPNTQN--PIIVSSGWDRLVKVWNLTNCKLKTNHYGHTGYVNTVTVSPDGSLCASGGKDSQAMLWDLNEGKHLYTLDGAGDTINALCFSPNRYWLCVASG--PSIKIWDLEGKVVVDEL---KPEVMGTTSKAPT---CLSLAWSADGQTLFAGYTDKLIRVWQVS 312
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: RCO1_NEUCR (Transcriptional repressor rco-1 OS=Neurospora crassa GN=rco-1 PE=4 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 52/171 (30.41%), Postives = 84/171 (49.12%), Query Frame = 2 Query: 206 LGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT--RAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 L + SV P G A+ + D +RV+D+ + T +++ + F G T+A +G G +V+LWD T + LSI + V +VA SPD + +A GS+D ++ V+D+ A+ L +GH V S+ +SP D R L S S D + M++ Sbjct: 345 LYIRSVCFSPDGKYLATGAEDKLIRVWDIQSRTIRNTFHGHEQDIYSLDFSRDGRTIA-SGSGDRTVRLWDIETGQNTSVLSI--------------EDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLAERLEGPDGHKDSVYSVAFSP-DGRNLVSGSLDKTIKMWE 499 HSP 2 Score: 67.3958 bits (163), Expect = 9.042e-11 Identity = 60/211 (28.44%), Postives = 100/211 (47.39%), Query Frame = 2 Query: 41 LKSVENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCL--GVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSE---VWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPV 658 +++ + HE+ ++++ + T + +GS D TV+LW D++ + + + GV +VA P A+ SLD VRV+D+ + LE P V+ + F P G L V+G ++K+W+ + I + S P G + FVLSVA +PD + + GS D + +D L+GH V S+ SPV Sbjct: 378 IRNTFHGHEQDIYSLDFSRDGRT----IASGSGDRTVRLW---DIETGQNTSVLSIEDGVTTVAISPDKQFVAAGSLDKSVRVWDMRGYLA-ERLEGPDGHKDSVYSVAFSPDGRNL-VSGSLDKTIKMWELSAPRGIPS-SAPPKGGRCIKTFEGHRDFVLSVALTPDSQWVLSGSKDRGVQFWDPRTGHTQLMLQGHKNSVISVAPSPV 578
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.822e-11 Identity = 54/200 (27.00%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 119 LLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYDAE 718 +++TG D+ V LW + +GH V SV + S + + S ++++D++ + TL + + M F P G +A +G +VKLWD R +G T K S + V + +SPDG+ + S D TI ++D+T K + H V + + P + +L S S D V +D E Sbjct: 31 VMVTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVA-SGSTDTNVKLWDV------------RRKGCIYTYKGHSDQ-VNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHP-NEFLLASGSSDRTVQFWDLE 215
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: TUP12_SCHPO (Transcriptional repressor tup12 OS=Schizosaccharomyces pombe GN=tup12 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 57/198 (28.79%), Postives = 94/198 (47.47%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHLEGHFMPVRSLVYSP 655 HE+ ++++ + +T L++GS D TV LW + + ++ GV +V P G A+ SLD +R++ + + L V+ + F P G L V+G ++KLW+ + +A S+ + G+ + K F+LSV SPDG+ I GS D TI + L+GH V S+ SP Sbjct: 375 HEQEIYSLDFSKDGKT----LVSGSGDRTVCLWDVEAGE-QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLHGHEESVYSVAFSPDGKYL-VSGSLDNTIKLWELQCVSNVAP-SMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVAVSP 564
BLAST of FC931782 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.379e-11 Identity = 59/218 (27.06%), Postives = 102/218 (46.79%), Query Frame = 2 Query: 62 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEAPPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRAKFLHHL-EGHFMPVRSLVYSPVDPRVLFSASDDTHVHMYD 712 HE+SV V+ P + T S D T+K+W +LE T GH G+ V ASAS D +R++D + S+ L+ + V + F+P G TL V+G +V++W+ + L P +P ++SV+ S DG A S DG ++DV + L L E +P+ +L ++ + + L ++ ++ + ++D Sbjct: 53 HEKSVTCVSVSP----NKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIWNLQDGTCLRML----PAHSEP---------IISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTE-NRKYLLVSNLNSQIRLWD 251 The following BLAST results are available for this feature:
BLAST of FC931782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931782 ID=FC931782; Name=FC931782; organism=Citrus clementina; type=EST; length=731bpback to top |