FC931783
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13_THEAC (50S ribosomal protein L13P OS=Thermoplasma acidophilum GN=rpl13p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11 Identity = 40/112 (35.71%), Postives = 59/112 (52.68%), Query Frame = 3 Query: 90 VIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISG--EFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKK 419 VID G + GRL++ VAK+LL G++I +V I+G EF K K + R GP++ + P IL ++I M+P K +G AL R +V PP +K+K Sbjct: 3 VIDASGAIYGRLSAYVAKRLLEGEEITIVNASKAVITGNKEFIIEKFK------ERLDIGSVRKGPYYPKTPENILRRSIGDMLPKKITKGKEALARCRVYRNTPPDIEKEK 108
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13_SULTO (50S ribosomal protein L13P OS=Sulfolobus tokodaii GN=rpl13p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 49/144 (34.03%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 78 ESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVG 509 E +VV++ + +LGR+A+ +AK L+ G+++VVV E ISG R Y NP + R P I+ + +RGM+P K G + L V GIP K K+++ + V RL+ KY TVG LS +G Sbjct: 3 EQLVVVNAENQILGRMATHIAKLLIQGKRVVVVNAEKAIISGPRARVVRGYSLIFSVRKFQNPEKNTIKRPRTPINIVKRTVRGMLP-KNKSGKMMFKNLIVFIGIPAEY-KDKQMIRFEDADVKRLK--GKYITVGELSKLLG 142
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13_PICTO (50S ribosomal protein L13P OS=Picrophilus torridus GN=rpl13p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 44/148 (29.73%), Postives = 71/148 (47.97%), Query Frame = 3 Query: 84 VVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISG--EFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVGWKYQ 521 ++ ID H+ GRL+S VAK+LLNG+ I +V + I+G EF K + R GP++ + RIL ++I M+P K G AL+R V +P + K + A+ + + T+G +S +G Y+ Sbjct: 1 MIYIDASNHIYGRLSSYVAKKLLNGESITIVNASKVVITGRKEFIIDK------FNNLRNTGSIRKGPYYPKTADRILKRSIGDMLPKKKTHGMEALKRCMVYANVPKSLENKNFERIESAMN----KKVTGFITLGEISKILGETYE 138
BLAST of FC931783 vs. ExPASy Swiss-Prot
Match: RL13_HALMA (50S ribosomal protein L13P OS=Haloarcula marismortui GN=rpl13p PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.446e-11 Identity = 47/148 (31.76%), Postives = 79/148 (53.38%), Query Frame = 3 Query: 66 MSSFESVVVIDGKGHLLGRLASTVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHAYLRKMTRFNPTRGGPFHFRAPSRILYKAIRGMMPHKTARGAAALERLKVLEGIPPPCDKKKRVVVPQALRVLRLRPGRKYCTVGRLSHEVG 509 ++ F++ V++D + ++GR+AS VA+Q L+G+ + VV E I+G R + Y +++ N G F+ + P I + IRGM+PHK RG A E ++V G P D+ V+ +L L K+ T+G +S +G Sbjct: 3 VAEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAERAVITG---REEQIVEKYEKRVDIGND--NGYFYPKRPDGIFKRTIRGMLPHKKQRGREAFESVRVYLG--NPYDEDGEVLDGTSLDRL---SNIKFVTLGEISETLG 140 The following BLAST results are available for this feature:
BLAST of FC931783 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 54
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931783 ID=FC931783; Name=FC931783; organism=Citrus clementina; type=EST; length=701bpback to top |