FC931784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_SULIN (Translation initiation factor 6 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.576e-15 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL N Sbjct: 95 LNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVAN 199 HSP 2 Score: 29.6462 bits (65), Expect = 1.576e-15 Identity = 19/80 (23.75%), Postives = 37/80 (46.25%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQAY 400 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D + Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEF 80
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_SULIL (Translation initiation factor 6 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.576e-15 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL N Sbjct: 95 LNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFSVKIDIGTVNFGSVFIRSGLVAN 199 HSP 2 Score: 29.6462 bits (65), Expect = 1.576e-15 Identity = 19/80 (23.75%), Postives = 37/80 (46.25%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQAY 400 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D + Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEF 80
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_SULIM (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.663e-15 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL N Sbjct: 95 LNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVAN 199 HSP 2 Score: 29.6462 bits (65), Expect = 2.663e-15 Identity = 19/80 (23.75%), Postives = 37/80 (46.25%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQAY 400 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D + Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEF 80
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_SULIK (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.663e-15 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL N Sbjct: 95 LNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVAN 199 HSP 2 Score: 29.6462 bits (65), Expect = 2.663e-15 Identity = 19/80 (23.75%), Postives = 37/80 (46.25%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQAY 400 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D + Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEF 80
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_SULIA (Translation initiation factor 6 OS=Sulfolobus islandicus (strain M.16.27) GN=eif6 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.663e-15 Identity = 45/105 (42.86%), Postives = 62/105 (59.05%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQ-TIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 + +++ALGN I N+ AL + + + E+II + LGVE R+ IA I VGS +N+GGLVH TS ++L EL L V + GTVN GS I +GL N Sbjct: 95 LNSKVTALGNTILTNNKAALIYPEFNDIEEKIIKETLGVEEIRRGKIAQMITVGSVGVVTNKGGLVHVDTSEKELKELEKLFGVKIDIGTVNFGSVFIRSGLVAN 199 HSP 2 Score: 29.6462 bits (65), Expect = 2.663e-15 Identity = 19/80 (23.75%), Postives = 37/80 (46.25%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVI--PVVKTSIGGNRIIGRLCVGNKNGLLLPHTTTDQAY 400 RL + +GV+ N + +V G S + + ++ +++ I + ++G GN NG+LLP +T D + Sbjct: 5 RLSIFGTDNIGVYIYTNNKYTVVPRG----LDSETKENIVQILGTELIEAEISRSFLLGIFISGNDNGILLPKSTIDDEF 80
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METBU (Translation initiation factor 6 OS=Methanococcoides burtonii (strain DSM 6242) GN=eif6 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.397e-15 Identity = 48/133 (36.09%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 318 VATGLSGGFVLVTKMGFSC--HTQPQTKRIEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 ++ G S GF++ S + + + + L+A+GN I ND AL H ++ + E+I+ VLGV+V R TIAG VG +NRG LVHP + ++L L + +P+ GT N GS+ +G+GL N Sbjct: 60 LSKGNSNGFLISRDANVSDLKDVEVPVEVLPDMLTAVGNVILANDTAALVHPEMTDSSIEVISRVLGVDVHRGTIAGLGTVGMAGVVTNRGLLVHPMVTPDELSVLEDVFALPIELGTTNYGSQAVGSGLLAN 192
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_METMA (Translation initiation factor 6 OS=Methanosarcina mazei GN=eif6 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15 Identity = 49/138 (35.51%), Postives = 75/138 (54.35%), Query Frame = 3 Query: 318 VATGLSGGFVLVTKMGFSCHTQPQTKR-------IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 ++ G S GF+L + + KR + +RL+A+GN + ND AL H +L EIIA L VEV+R TIAG VG +N+G LVHP ++ + + L + +P+ GT N G++++G+GL N Sbjct: 60 LSRGNSNGFLLP----YGSSVEEMQKRTGVPAGILPDRLNAVGNIVLANDSAALVHPELSDRALEIIARTLKVEVYRGTIAGIKNVGMAGVVTNKGLLVHPKVTVSEREALEEIFGLPVNIGTTNFGTQMLGSGLLAN 193
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_PICTO (Translation initiation factor 6 OS=Picrophilus torridus GN=eif6 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.502e-15 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 3 Query: 399 IEERLSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 I +L+A GN I NDH AL H + I DVLGVE + +IAG VGS ++RG LV +++ LS L ++ + GT N GS +GA + N Sbjct: 91 INNKLNAAGNNIIANDHAALIHKSFPDSIRKKIEDVLGVETVKGSIAGIKTVGSVAVLNDRGMLVTSEADEDEIKYLSDLFKINVKTGTANFGSNYVGASIIAN 194 HSP 2 Score: 30.4166 bits (67), Expect = 4.502e-15 Identity = 20/72 (27.78%), Postives = 35/72 (48.61%), Query Frame = 2 Query: 158 MATRLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLL 373 M ++ NS +GV+++ N + + S+ FE L V K SIG + +IG + N NG+++ Sbjct: 1 MIKKVSILNSNFIGVYARTWNDVTFLPVNISDEEKRIFEETLKT--EVYKISIGNSFLIGSMLSMNSNGIVV 70
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_TRYCR (Eukaryotic translation initiation factor 6 (Fragment) OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.794e-15 Identity = 37/63 (58.73%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 522 FRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGLTVN 710 FR +IA N LVGSY +N+G +VHP T +D+DE+++LLQVP+VAGT+NRG+ IG+GL VN Sbjct: 4 FRTSIAENALVGSYAVVNNKGCMVHPKTPAQDMDEIASLLQVPVVAGTINRGNAAIGSGLVVN 66
BLAST of FC931784 vs. ExPASy Swiss-Prot
Match: IF6_HALS3 (Translation initiation factor 6 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=eif6 PE=3 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 9.875e-15 Identity = 30/97 (30.93%), Postives = 48/97 (49.48%), Query Frame = 3 Query: 411 LSALGNCIACNDHVALAHTDLDRETEEIIADVLGVEVFRQTIAGNILVGSYCSFSNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIGAGL 701 ++A GN + ND A H+ L + + + L V R +AG VG+ + G L HP + +L+ + L V GTVN G+ ++G+GL Sbjct: 95 VNAAGNVVVANDDGAYVHSGLSDDAVAAVEETLDVSATRGQLAGVDTVGTAAVATTDGVLCHPKATDAELERIEETLGVYADVGTVNYGAPLVGSGL 191 HSP 2 Score: 46.9802 bits (110), Expect = 9.875e-15 Identity = 24/69 (34.78%), Postives = 38/69 (55.07%), Query Frame = 2 Query: 167 RLMFENSCEVGVFSKLTNAFCLVAIGGSESFYSTFEAELADVIPVVKTSIGGNRIIGRLCVGNKNGLLL 373 R F S +GVF++ T + LV + F + EL +P V+T++GG+ +G L GN +GLL+ Sbjct: 3 RAAFRGSAYIGVFARATESCVLVRPDLDDDFVDSIADELG--VPAVQTTVGGSSTVGSLAAGNSSGLLV 69 The following BLAST results are available for this feature:
BLAST of FC931784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931784 ID=FC931784; Name=FC931784; organism=Citrus clementina; type=EST; length=712bpback to top |