FC931785
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_KLULA (40S ribosomal protein S6 OS=Kluyveromyces lactis GN=RPS6 PE=3 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.037e-52 Identity = 114/211 (54.03%), Postives = 140/211 (66.35%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAA 707 MK NI+ P G QK +EIDD+ ++R F+DKRI QEV G+++G+EFKGYVFKI GG DKQGFPMKQGVL P RV+LLL +G C+ IV PDL+VL L+I KKGE ++ G+T+ P+ GPKRA+ IRK F L+KEDDVR YV R TK K +KAPKIQRLVTP LQRKR + K + A+ Q EAA Sbjct: 1 MKLNISYPINGTQKCIEIDDEHRVRVFYDKRIGQEVDGESVGDEFKGYVFKIAGGNDKQGFPMKQGVLLPTRVKLLLAKGHSCY--RPRRNGERKRKSVRGAIVGPDLAVLALIITKKGEQEIEGITNDTVPKRLGPKRANNIRKFFGLTKEDDVRDYV---IRREVTKGDKSYTKAPKIQRLVTPQRLQRKRQQ-KSLKIKNAQAQREAA 205
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_DICDI (40S ribosomal protein S6 OS=Dictyostelium discoideum GN=rps6 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 8.558e-51 Identity = 112/212 (52.83%), Postives = 134/212 (63.21%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAKGQAEAAE 710 MK NIA P G QKK+ I+D K+R F +KRI QEV LG+EFKGYVFKI GG D +GFPM QGV P RVRLLL + CF CIV+ D++ L L+IVKKG+ ++PGLTD P +GPKRAS IRKLF LSK++DVR +V R T K SKAPKIQRLVTP T+ R++A A+K R K EAAE Sbjct: 1 MKLNIAYPVNGSQKKINIEDKNKVRCFMEKRIGQEVEATTLGDEFKGYVFKITGGNDTEGFPMMQGVGAPTRVRLLLDGRSGCF--KPSRDGERKRKSVRGCIVAEDIASLQLIIVKKGDAEIPGLTDVSFPASKGPKRASNIRKLFKLSKDEDVRSFV-IRRELPATDKRKAKSKAPKIQRLVTPTTVARRKALRAKKAARHTKASNEAAE 209
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_LEIMA (40S ribosomal protein S6 OS=Leishmania major GN=RPS6 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.113e-41 Identity = 103/215 (47.91%), Postives = 128/215 (59.53%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQRKRARIAEK-KQRIAKGQAEAAE 710 MK NIA P G K+ EI D+ R D R+ EV G G EFKGY+F++ GG DK GFPM GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP R +AR A+K K IAK +A AAE Sbjct: 1 MKLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITP----RVKARRAKKAKDAIAKVRASAAE 208
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_LEIIN (40S ribosomal protein S6 OS=Leishmania infantum GN=RPS6 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.369e-40 Identity = 102/215 (47.44%), Postives = 127/215 (59.07%), Query Frame = 3 Query: 75 MKFNIANPTTGCQKKLEIDDDQKLRAFF-DKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKTGKKVS-KAPKIQRLVTPLTLQRKRARIAEK-KQRIAKGQAEAAE 710 M NIA P G K+ EI D+ R D R+ EV G G EFKGY+F++ GG DK GFPM GVL RV LL+ RG F C+++ D++++N+ I K G+ + G+TDT PR GPKRASKIRKLFNLS+ +DVRKYV R K+GKK KAPKIQRL+TP R +AR A+K K IAK +A AAE Sbjct: 1 MYLNIAYPRNGTVKQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGYQGERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRR---VVKSGKKDRLKAPKIQRLITP----RVKARRAKKAKDAIAKVRASAAE 208
BLAST of FC931785 vs. ExPASy Swiss-Prot
Match: RS6_ENCCU (40S ribosomal protein S6 OS=Encephalitozoon cuniculi GN=RPS6 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.287e-18 Identity = 61/199 (30.65%), Postives = 101/199 (50.75%), Query Frame = 3 Query: 123 EIDDDQKLRAFFDKRISQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFXXXXXXXXXXXXXXXXXCIVSPDLSVLNLVIVKKGEHDLPGLTDTEKPRMRGPKRASKIRKLFNL-SKEDDVRKYVNTYRRT---------FTTKTGKKVSKAPKIQRLVTPLTLQRKRARIAEKKQRIAK 689 EI+ ++R +DK+I + G LGEEF+G + +I GG D QGFPM G LT RVR LL +G + IVS ++ VLNL+I++ GE ++ GLT+ P++ K+RK+F + +E +V Y+ ++ GK++ + + + + + L+RKR E+K+ + K Sbjct: 3 EIERRNEVR-LYDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGY--RCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRHNGKRMKREQERREQIMKIRLERKRILEEERKEYLEK 198 The following BLAST results are available for this feature:
BLAST of FC931785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931785 ID=FC931785; Name=FC931785; organism=Citrus clementina; type=EST; length=712bpback to top |