FC931790
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_PYRFU (50S ribosomal protein L19e OS=Pyrococcus furiosus GN=rpl19e PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.705e-21 Identity = 50/138 (36.23%), Postives = 80/138 (57.97%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRAL 458 M L Q+R+AA ++ CG+ +IW+DP ++++++A +R+ I++L+ +G+I +KP+ SR A+ +E ++ GRHRG G RKG K ARM + A KID+ Y LY +KG FK+K L Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_PYRAB (50S ribosomal protein L19e OS=Pyrococcus abyssi GN=rpl19e PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.705e-21 Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQK 476 M L Q+R+AA ++ CG+ +IW+DP ++++++A +R+ IR+L+ +G+I +KPV SR AR +E ++ GRHRG G RKG K ARM + KID+ Y LY +KG FK K L +++ Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEE 144
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_METJA (50S ribosomal protein L19e OS=Methanocaldococcus jannaschii GN=rpl19e PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.318e-18 Identity = 43/144 (29.86%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQK 476 +++++ Q+R+AA ++ CG ++W+DP +++ + A S+ IR L+ +G+I +K S A ++L E R+ GR RG G R+G AR P + +GKID+ +Y +LY ++KG F+ + L ++++ Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLYMRE 146
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_METTH (50S ribosomal protein L19e OS=Methanobacterium thermoautotrophicum GN=rpl19e PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.007e-18 Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 48 VNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHK 449 +NLTTQKRLAA ++ G +IW+DP ++E+S A +R +++L+ DG I KP S ++++ + ++ GR RG G KG K AR P + +I+K Y +LY ++KG FK K Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_METVA (50S ribosomal protein L19e OS=Methanococcus vannielii GN=rpl19e PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.457e-17 Identity = 41/134 (30.60%), Postives = 76/134 (56.72%), Query Frame = 3 Query: 48 VNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHK 449 ++++TQ+R+AA+V+ CG ++W+DP + ++ A ++ IR L++DG+I++K S A +E+ E +R G+ +G G R+G K AR P + KI++ Y +LY ++KG F+ + Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 3 Query: 54 LTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARE 239 L QKRLAAS + CGK K+WLDPNE++EIS ANSRQ IRKLV DG II+KP +HSR+ ++ Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRCKK 62
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19E_HALSA (50S ribosomal protein L19e OS=Halobacterium salinarium GN=rpl19e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 45/144 (31.25%), Postives = 73/144 (50.69%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHIQK 476 M +L+ QKRLAA V+ G+ ++W DP+ +EI++A +R+ IR+LV+DG I + +SR ARE + G +G G RKG AR + G + Y E+Y+++ G F R L ++++ Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMYNMANGGEFDSVRRLTNYVEE 144
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_HALMA (50S ribosomal protein L19e OS=Haloarcula marismortui GN=rpl19e PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.358e-14 Identity = 45/142 (31.69%), Postives = 67/142 (47.18%), Query Frame = 3 Query: 45 MVNLTTQKRLAASVVGCGKRKIWLDPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHI 470 M +L+ QKRLAA V+ GK ++W +P +I++A +R+ +R+LV +G I K +SR ARE + R G +G G RKG AR S+ G + Y +LY + G F L +I Sbjct: 1 MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEFDSVADLERYI 142
BLAST of FC931790 vs. ExPASy Swiss-Prot
Match: RL19_AERPE (50S ribosomal protein L19e OS=Aeropyrum pernix GN=rpl19e PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 42/138 (30.43%), Postives = 69/138 (50.00%), Query Frame = 3 Query: 63 QKRLAASVVGCGKRKIWL--DPNEMNEISNANSRQTIRKLVSDGLIIRKPVTMHSRASARELNEARRNGRHRGLGKRKGTKDARMPSQXXXXXXXXXXXXXXXXXXAAGKIDKHLYHELYHLSKGNTFKHKRALVEHI 470 Q+RLAA ++G G+ +IW+ DP EI A ++ +R L+ G+I P ++ +++ + RR GR RG+G+RKG AR+ + ID+ Y LY L+KG TF+ +L ++ Sbjct: 6 QRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRDLASLKRYM 143 The following BLAST results are available for this feature:
BLAST of FC931790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931790 ID=FC931790; Name=FC931790; organism=Citrus clementina; type=EST; length=673bpback to top |