FC931797

Overview
NameFC931797
Unique NameFC931797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK3_HUMAN (Serine/threonine-protein kinase SIK3 OS=Homo sapiens GN=SIK3 PE=1 SV=3)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 88/184 (47.83%), Postives = 123/184 (66.85%), Query Frame = 1
Query:   22 VSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  I RE+ IM+ L HPHI++LY+V+ T+  IY V E+  GGE+F   +A GR +E  +R+  +Q+V+AV +CH R + HRDLK ENLLLD N N+K++DFG S     + T G LL T CG+P Y APE+   K YDG KVD+WS GV+L+VL  G LPF+   L ++  ++  G+FR P +M
Sbjct:   49 LKKIFREVQIMKMLCHPHIIRLYQVMETERMIYLVTEYASGGEIFDHLVAHGRMAEKEARRKFKQIVTAVYFCHCRNIVHRDLKAENLLLDANLNIKIADFGFS----NLFTPGQLLKTWCGSPPYAAPELFEGKEYDGPKVDIWSLGVVLYVLVCGALPFDGSTLQNLRARVLSGKFRIPFFM 228          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK2_MOUSE (Serine/threonine-protein kinase MARK2 OS=Mus musculus GN=Mark2 PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 9.750e-44
Identity = 85/188 (45.21%), Postives = 126/188 (67.02%), Query Frame = 1
Query:    7 MSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++S+ +  + RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K  DG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:   89 LNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFS---NEFTFGNKLDTFCGSPPYAAPELFQGKKIDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 273          

HSP 2 Score: 23.483 bits (49), Expect = 9.750e-44
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG 668
            NP  R T++QI+ D W   G
Sbjct:  288 NPSKRGTLEQIMKDRWMNVG 307          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  106 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYM 280          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK1_MOUSE (Serine/threonine-protein kinase MARK1 OS=Mus musculus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.323e-43
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  106 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRVPFYM 280          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MARK1_HUMAN (Serine/threonine-protein kinase MARK1 OS=Homo sapiens GN=MARK1 PE=1 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.655e-43
Identity = 85/178 (47.75%), Postives = 121/178 (67.98%), Query Frame = 1
Query:   37 REISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAK-IAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            RE+ IM+ LNHP+IVKL+EV+ T+  +Y VME+  GGE+F   +A GR  E  +R   +Q+VSAV YCH + + HRDLK ENLLLD + N+K++DFG S   ++      L T CG+P Y APE+   K YDG +VD+WS GVIL+ L +G LPF+  NL  + +++ +G++R P +M
Sbjct:  106 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS---NEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPFYM 280          

HSP 2 Score: 21.557 bits (44), Expect = 1.655e-43
Identity = 14/38 (36.84%), Postives = 21/38 (55.26%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKKG-GLKELRFY---DSDYYD 710
            NP  R +++QI+ D W   G   +EL+ Y   D D+ D
Sbjct:  295 NPIKRGSLEQIMKDRWMNVGHEEEELKPYTEPDPDFND 332          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK1_RAT (Serine/threonine-protein kinase SIK1 OS=Rattus norvegicus GN=Sik1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 87/190 (45.79%), Postives = 128/190 (67.37%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ SSNL   I RE+ +M+ LNHP+I+KLY+V+ TK  +Y V EF K GE+F  + + G  SE+ +RK   Q++SAV YCH+  + HRDLK ENLLLD N ++K++DFG     +  +    L T CG+P Y APE+   K Y+G ++D+WS GV+L+VL  G LPF+ PNL ++ +++ +G FR P +M
Sbjct:   62 RLDSSNL-EKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHNHHIVHRDLKTENLLLDGNMDIKLADFGFG---NFYKPGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFM 247          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.029e-43
Identity = 82/180 (45.56%), Postives = 119/180 (66.11%), Query Frame = 1
Query:   31 IKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFA-KIAKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++RE+ IM+ L+HP+I++LYEV+ T   +Y +ME+   GE+    IA G  +E  +R +  Q+VSA+ YCHS+   HRDLKPENLLLD N  +K+ DFGLS V         L T CG+P Y +PE++ +K Y+G  VD+WS GV+LFVL  GYLPF+  N + +++KI  G +  P ++
Sbjct:  154 VQREVRIMKLLHHPNIIRLYEVIETSRALYLIMEYAGEGEVMDFMIAHGVLTESQARTFFTQIVSAINYCHSKRAVHRDLKPENLLLDCNRQIKIIDFGLSNV---FTPGSYLKTFCGSPTYASPELILRKEYNGPSVDVWSMGVVLFVLVTGYLPFDGDNYVELFQKILAGNYTIPSYL 330          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.120e-42
Identity = 83/197 (42.13%), Postives = 127/197 (64.47%), Query Frame = 1
Query:    1 KIMSSNLVSN-------IKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI++  L+ N       I+REI +M+ ++HP+ +K+YEV  T   ++ ++E+V+GGELF  +  KG      +  + QQ++  + YCHSR + HRDLKPENLLL  +  +K++DFG+ ++   +R D LLHT CG+P Y +PE++S   YDG K D+WSCGVIL+ L  G LPF+D N+  +  K+  G F  P ++
Sbjct:   38 KIINKELLINKPSMRRKIEREIVLMKLIDHPNAMKMYEVYETSKYLFLILEYVEGGELFDYLVEKGGLESGEALFFFQQIIIGLEYCHSRNICHRDLKPENLLLSGDKRIKIADFGMGSI---VRKDMLLHTSCGSPHYASPEVVSGIDYDGQKADVWSCGVILYALLTGKLPFDDENIRRLLNKVKNGAFSMPPYI 231          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK2_PONAB (Serine/threonine-protein kinase SIK2 OS=Pongo abelii GN=SIK2 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.463e-42
Identity = 83/183 (45.36%), Postives = 122/183 (66.67%), Query Frame = 1
Query:   22 VSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  I RE+ IM+ L+HPHI+KLY+V+ TKS +Y V E+ K GE+F  +A  GR +E  +R+   Q++SAV YCH R + HRDLK ENLLLD N N+K++DF      +  ++  LL T  G+P Y APE+   + Y+G ++D+WS GV+L+VL  G LPF+ P L  + +++ +G FR P +M
Sbjct:   61 LEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNMNIKIADFSFG---NFFKSGELLATWRGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFM 240          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SIK1_MOUSE (Serine/threonine-protein kinase SIK1 OS=Mus musculus GN=Sik1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.261e-42
Identity = 85/190 (44.74%), Postives = 127/190 (66.84%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKI-AKGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDGLLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            ++ SSNL   I RE+ +M+ LNHP+I+KLY+V+ TK  +Y V EF K GE+F  + + G  SE+ +R+   Q++SAV YCH+  + HRDLK ENLLLD N ++K++DFG     +  +    L T  G+P Y APE+   K Y+G ++D+WS GV+L+VL  G LPF+ PNL ++ +++ +G FR P +M
Sbjct:   62 RLDSSNL-EKIYREVQLMKLLNHPNIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARQKFWQILSAVEYCHNHHIVHRDLKTENLLLDSNMDIKLADFGFG---NFYKPGEPLSTCVGSPPYAAPEVFEGKEYEGPQLDVWSLGVVLYVLVCGSLPFDGPNLPTLRQRVLEGRFRIPFFM 247          
The following BLAST results are available for this feature:
BLAST of FC931797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SIK3_HUMAN7.758e-4447.83Serine/threonine-protein kinase SIK3 OS=Homo sapie... [more]
MARK2_MOUSE9.750e-4445.21Serine/threonine-protein kinase MARK2 OS=Mus muscu... [more]
MARK1_RAT1.323e-4347.75Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]
MARK1_MOUSE1.323e-4347.75Serine/threonine-protein kinase MARK1 OS=Mus muscu... [more]
MARK1_HUMAN1.655e-4347.75Serine/threonine-protein kinase MARK1 OS=Homo sapi... [more]
SIK1_RAT2.948e-4345.79Serine/threonine-protein kinase SIK1 OS=Rattus nor... [more]
MRKA_DICDI5.029e-4345.56Probable serine/threonine-protein kinase MARK-A OS... [more]
Y7165_DICDI1.120e-4242.13Probable serine/threonine-protein kinase DDB_G0277... [more]
SIK2_PONAB1.463e-4245.36Serine/threonine-protein kinase SIK2 OS=Pongo abel... [more]
SIK1_MOUSE7.261e-4244.74Serine/threonine-protein kinase SIK1 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionC34201C09EF PostHarveN Citrus clementina cDNA clone C34201C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931797 ID=FC931797; Name=FC931797; organism=Citrus clementina; type=EST; length=710bp
AAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGAGAAATCTCCAT
CATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTACGAGGTCTTAG
CCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCAAAGGCGGCGAG
CTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAA
GTACCTCCAGCAACTCGTATCCGCCGTCGGATATTGCCACTCGCGCGGAG
TCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGGACGAGAACGGG
AATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAGGATCAGATTCG
TACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGCTTACGTGGCAC
CGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGGTCGACTTGTGG
TCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTACCTGCCGTTTAA
CGATCCGAATTTGATGAGCATGTATAAGAAGATATATAAAGGTGAATTTC
GGTGCCCTAAATGGATGTCTAGCGATCTGAGACGGCTTTTGTCGCGACTT
CTTGATACAATCCAGAGACGAGGATCACCGTTGATCAGATTATTCATGAT
CCGTGGTTCAAAAAGGGCGGACTGAAAGAATTGAGATTCTACGATTCTGA
TTATTACGAT
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