FC931797

Overview
NameFC931797
Unique NameFC931797
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.740e-47
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+  QQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   51 KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 237          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 5.740e-47
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+  QQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   51 KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYL 237          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 7.669e-47
Identity = 91/190 (47.89%), Postives = 131/190 (68.95%), Query Frame = 1
Query:    4 IMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  S++   ++REIS +R L HPHI+KLY+V+ +K +I  V+EF  G ELF  I  +G+  ED +R++ QQ+++AV YCH   + HRDLKPENLLLD+  N+K++DFGLS     I TDG  L T CG+P Y APE++S K Y G +VD+WS GVIL+V+  G LPF+D  + +++KKI  G +  P ++
Sbjct:   88 LAKSDMQGRVEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEFA-GKELFDYIVQRGKMPEDEARRFFQQIIAAVEYCHRHKIVHRDLKPENLLLDDQLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSSGVILYVMLCGRLPFDDEFIPALFKKISNGVYTLPNYL 272          

HSP 2 Score: 28.1054 bits (61), Expect = 7.669e-47
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFKK 665
            NP  RIT+ +I+ D WFK+
Sbjct:  287 NPLNRITIHEIMEDEWFKQ 305          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 9.791e-47
Identity = 95/191 (49.74%), Postives = 130/191 (68.06%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  IKREI  ++   HPHI+KLY+V++T +  + VME+V GGELF  I K GR  E  +R+  QQ++SAV YCH   V HRDLKPEN+LLD   N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WSCGVIL+ L  G LPF+D ++ +++KKI  G F  P ++
Sbjct:   51 KIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPDYL 237          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+  QQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   62 KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 248          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+  QQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   57 KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 243          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK1_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Mus musculus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+  QQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   62 KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 248          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 95/191 (49.74%), Postives = 131/191 (68.59%), Query Frame = 1
Query:    1 KIMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIAK-GRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            KI S ++V  I+REI  ++   HPHI+KLY+V++T S I+ VME+V GGELF  I K GR  E  SR+  QQ++S V YCH   V HRDLKPEN+LLD + N K++DFGLS     + +DG  L T CG+P Y APE++S + Y G +VD+WS GVIL+ L  G LPF+D ++ +++KKI  G F  P+++
Sbjct:   62 KIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYL 248          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.698e-46
Identity = 92/190 (48.42%), Postives = 131/190 (68.95%), Query Frame = 1
Query:    4 IMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  S++   I+REIS +R L HPHI+KLY+V+ +K +I  V+E+  G ELF  I  + + SE  +R++ QQ++SAV YCH   + HRDLKPENLLLDE+ N+K++DFGLS     I TDG  L T CG+P Y APE++S K Y G +VD+WSCGVIL+V+    LPF+D ++  ++K I  G +  PK++
Sbjct:   75 LAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRNKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 259          

HSP 2 Score: 26.1794 bits (56), Expect = 1.698e-46
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFK 662
            NP  RI++ +I+ D WFK
Sbjct:  274 NPLNRISIHEIMQDEWFK 291          
BLAST of FC931797 vs. ExPASy Swiss-Prot
Match: SNF1_YEAST (Carbon catabolite-derepressing protein kinase OS=Saccharomyces cerevisiae GN=SNF1 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.212e-46
Identity = 92/190 (48.42%), Postives = 131/190 (68.95%), Query Frame = 1
Query:    4 IMSSNLVSNIKREISIMRRLNHPHIVKLYEVLATKSKIYCVMEFVKGGELFAKIA-KGRFSEDLSRKYLQQLVSAVGYCHSRGVFHRDLKPENLLLDENGNLKVSDFGLSAVKDQIRTDG-LLHTLCGTPAYVAPEILSKKGYDGAKVDLWSCGVILFVLTAGYLPFNDPNLMSMYKKIYKGEFRCPKWM 567
            +  S++   I+REIS +R L HPHI+KLY+V+ +K +I  V+E+  G ELF  I  + + SE  +R++ QQ++SAV YCH   + HRDLKPENLLLDE+ N+K++DFGLS     I TDG  L T CG+P Y APE++S K Y G +VD+WSCGVIL+V+    LPF+D ++  ++K I  G +  PK++
Sbjct:   91 LAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFL 275          

HSP 2 Score: 26.1794 bits (56), Expect = 2.212e-46
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3
Query:  609 NPETRITVDQIIHDPWFK 662
            NP  RI++ +I+ D WFK
Sbjct:  290 NPLNRISIHEIMQDDWFK 307          
The following BLAST results are available for this feature:
BLAST of FC931797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK2_RAT5.740e-4749.745'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG5.740e-4749.745'-AMP-activated protein kinase catalytic subunit ... [more]
SNF1_CANTR7.669e-4747.89Carbon catabolite-derepressing protein kinase OS=C... [more]
AAPK2_MOUSE9.791e-4749.745'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_RAT1.279e-4649.745'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB1.279e-4649.745'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_MOUSE1.279e-4649.745'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN1.279e-4649.745'-AMP-activated protein kinase catalytic subunit ... [more]
SNF1_CANGA1.698e-4648.42Carbon catabolite-derepressing protein kinase OS=C... [more]
SNF1_YEAST2.212e-4648.42Carbon catabolite-derepressing protein kinase OS=S... [more]

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Properties
Property NameValue
Genbank descriptionC34201C09EF PostHarveN Citrus clementina cDNA clone C34201C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931797 ID=FC931797; Name=FC931797; organism=Citrus clementina; type=EST; length=710bp
AAGATCATGTCCTCCAATTTAGTCTCCAACATCAAGCGAGAAATCTCCAT
CATGCGCCGTTTGAACCACCCTCACATCGTCAAGCTCTACGAGGTCTTAG
CCACCAAGTCCAAGATTTACTGCGTCATGGAGTTCGTCAAAGGCGGCGAG
CTCTTCGCGAAGATCGCCAAAGGCCGGTTCAGCGAAGACCTTAGCCGCAA
GTACCTCCAGCAACTCGTATCCGCCGTCGGATATTGCCACTCGCGCGGAG
TCTTCCACCGCGACTTGAAGCCGGAGAACCTTTTGCTGGACGAGAACGGG
AATTTAAAAGTCTCGGATTTCGGACTCAGCGCCGTGAAGGATCAGATTCG
TACGGACGGGCTGTTGCACACGCTTTGTGGGACCCCTGCTTACGTGGCAC
CGGAGATTTTGTCTAAGAAGGGATACGATGGAGCTAAGGTCGACTTGTGG
TCATGCGGCGTCATTTTGTTCGTATTGACGGCAGGTTACCTGCCGTTTAA
CGATCCGAATTTGATGAGCATGTATAAGAAGATATATAAAGGTGAATTTC
GGTGCCCTAAATGGATGTCTAGCGATCTGAGACGGCTTTTGTCGCGACTT
CTTGATACAATCCAGAGACGAGGATCACCGTTGATCAGATTATTCATGAT
CCGTGGTTCAAAAAGGGCGGACTGAAAGAATTGAGATTCTACGATTCTGA
TTATTACGAT
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