FC931798
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: PR1A_HORVU (Pathogenesis-related protein 1A/1B OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27 Identity = 71/200 (35.50%), Postives = 92/200 (46.00%), Query Frame = 3 Query: 117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 713 F+I NNC T+W A +P GGG +L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAE+ + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y++ FCP Sbjct: 23 FNIKNNCGSTIWPAGIPVGGGFELGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGQPPATLAEFTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: TLP_WHEAT (Thaumatin-like protein PWIR2 OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.464e-26 Identity = 72/200 (36.00%), Postives = 91/200 (45.50%), Query Frame = 3 Query: 117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 713 F+I NNC T+W A +P GGG L GQT +I GT+A RIWART C F+ G G C+TGDC G L C G P TLAEY + + DF D+S IDGFN+ M+FS C+ D C +C P P Y +P D +T C +Y++ FCP Sbjct: 23 FNIKNNCGFTIWPAGIPVGGGFALGSGQTSSINVPAGTQAGRIWARTGCSFNG-GSGSCQTGDCGGQLSCSLSGRPPATLAEYTIGGGSTQDFYDISVIDGFNLAMDFS-----------CSTG------------------------DALQCRDPSCPP-----------PQAYQHPND--VATHACSGNNNYQITFCP 173
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: RST4_AVESA (Thaumatin-like pathogenesis-related protein 4 OS=Avena sativa GN=RASTL-4 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.912e-26 Identity = 72/200 (36.00%), Postives = 96/200 (48.00%), Query Frame = 3 Query: 117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 713 F ITNNC TVW AA+P GGG+QLD+GQTWT+ GT + RIW RT C F+ G G C+TGDC G L C G P TLAE+++ + D+ D+S ID +N+ M+FS C+ +C + CPD Y P D T +C T ++Y++ FCP Sbjct: 24 FTITNNCGYTVWPAAIPVGGGQQLDQGQTWTLNVPAGTNSGRIWGRTGCSFN-GGSGSCQTGDCAGALSCTLSG-QPATLAEFSIG--GEHDYYDISVIDVYNLAMDFS-----------CSTGDALQCRD-------------------------------------SSCPDAYHQPDD--PKTHSCNTNSNYQITFCP 169
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: PRR3_JUNVI (Pathogenesis-related protein (Fragment) OS=Juniperus virginiana PE=1 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.562e-26 Identity = 52/83 (62.65%), Postives = 59/83 (71.08%), Query Frame = 3 Query: 114 KFDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEY 362 KFDI N C TVWAA +PGGG++LD+GQTWT+ GT +AR W RT C FDASGKG C+TGDC L C GA P TLAEY Sbjct: 21 KFDIKNQCGYTVWAAGLPGGGKRLDQGQTWTVNLAAGTASARFWGRTGCTFDASGKGSCQTGDCGRQLSCTVSGAVPATLAEY 103
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: RST1_AVESA (Thaumatin-like pathogenesis-related protein 1 OS=Avena sativa GN=RASTL-1 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.986e-24 Identity = 71/200 (35.50%), Postives = 91/200 (45.50%), Query Frame = 3 Query: 117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 713 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDGFN+ M+FS C+ + +C + CPD Y +P D +T C ++Y++ FCP Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGFNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: RST3_AVESA (Thaumatin-like pathogenesis-related protein 3 OS=Avena sativa GN=RASTL-3 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 74/200 (37.00%), Postives = 94/200 (47.00%), Query Frame = 3 Query: 117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 713 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + LK C +SG CPD Y +P D +T C ++Y++ FCP Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGV------ALK-----------------CRDSG--------------CPDAYHHPND--VATHACNGNSNYQITFCP 169
BLAST of FC931798 vs. ExPASy Swiss-Prot
Match: RST2_AVESA (Thaumatin-like pathogenesis-related protein 2 OS=Avena sativa GN=RASTL-2 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 70/200 (35.00%), Postives = 91/200 (45.50%), Query Frame = 3 Query: 117 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCNGPCPVFKTDEYCCNSGNCGPTGFSKFFKDRCPDVYSYPKDDATSTFTCPTGTDYKVVFCP 713 F ITNNC TVW A +P GGG QL+ Q+ I GT A RIW RT C F+ +G+G C TGDC G L C G P TLAEY + DF D+S IDG+N+ M+FS C+ + +C + CPD Y +P D +T C ++Y++ FCP Sbjct: 24 FRITNNCGFTVWPAGIPVGGGFQLNSKQSSNINVPAGTSAGRIWGRTGCSFN-NGRGSCATGDCAGALSCTLSG-QPATLAEYTIG--GSQDFYDISVIDGYNLAMDFS-----------CSTGVALKCRDA-------------------------------------NCPDAYHHPND--VATHACNGNSNYQITFCP 169 The following BLAST results are available for this feature:
BLAST of FC931798 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931798 ID=FC931798; Name=FC931798; organism=Citrus clementina; type=EST; length=713bpback to top |