FC931800

Overview
NameFC931800
Unique NameFC931800
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14332_MAIZE (14-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE=2 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.973e-82
Identity = 156/226 (69.03%), Postives = 184/226 (81.42%), Query Frame = 3
Query:   57 EKEREHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLL 728
            E  RE +VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE +GNE  V  IK+YR ++E EL KIC+ IL +++ HL+PSST+ ES VFY KMKGDYYRYLAEFK   +RK+AA++++           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFDEAI+ELD+L+EESY DSTLIMQLL
Sbjct:    5 ELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLSEESYKDSTLIMQLL 230          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14332_SOLLC (14-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 PE=3 SV=2)

HSP 1 Score: 305.064 bits (780), Expect = 2.576e-82
Identity = 155/224 (69.20%), Postives = 187/224 (83.48%), Query Frame = 3
Query:   66 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            RE +VY+A+LAEQAERY+EMV+ M+KV+      ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE++VK IKEYR ++E EL+ IC+ IL ++D +LIPS+++G+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIAELD+L EESY DSTLIMQLLR
Sbjct:    3 REENVYMAKLAEQAERYEEMVQFMEKVSTSLGSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEEHVKCIKEYRSKIESELSDICDGILKLLDSNLIPSASNGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKAAQDIANTELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 226          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 304.679 bits (779), Expect = 3.365e-82
Identity = 158/227 (69.60%), Postives = 183/227 (80.62%), Query Frame = 3
Query:   54 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKG-NEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            M   RE  VYLA+LAEQAERY+EMVE MK VA    EL+VEERNL+SV YKNVIGARRASWRI+SSIEQKEE+K  +E  V+ I  YR ++E EL KI +DILSV+D HLIPS+T+GES VFYYKMKGDY+RYLAEF   D R++A + SL+          +ELPPTHPIRLGLALNFSVFYYEI NSP++ACHLAK AFD+AIAELD+L+EESY DSTLIMQLLR
Sbjct:    1 MSTSREDSVYLAKLAEQAERYEEMVENMKTVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDYHRYLAEFSSGDAREKATNASLEAYKTASEIATTELPPTHPIRLGLALNFSVFYYEIQNSPDKACHLAKQAFDDAIAELDTLSEESYKDSTLIMQLLR 227          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 1433_PEA (14-3-3-like protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.395e-82
Identity = 157/224 (70.09%), Postives = 186/224 (83.04%), Query Frame = 3
Query:   66 REHHVYLARLAEQAERYDEMVEAMKKV-AKLDVE-LTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            RE +VY+A+LAEQAERY+EMVE M+KV A  D E LTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  I++YR ++E EL+ IC+ IL ++D  LIPS++SG+S VFY KMKGDY+RYLAEFK   +RKEAA+ +L           +ELPPTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIAELD+L EESY DSTLIMQLLR
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVSANADSEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDTRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTGYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 231          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14337_ARATH (14-3-3-like protein GF14 nu OS=Arabidopsis thaliana GN=GRF7 PE=1 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 5.740e-82
Identity = 156/228 (68.42%), Postives = 188/228 (82.46%), Query Frame = 3
Query:   54 MEKEREHHVYLARLAEQAERYDEMVEAMKKVAK-LDV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            M   RE +VYLA+LAEQAERY+EMVE M+KVAK +D  ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  IK+YR ++E EL+KIC+ IL+++D HL+P+++  ES VFY KMKGDY+RYLAEFK   +RKEAA+ +L           ++L PTHPIRLGLALNFSVFYYEILNSP+RAC LAK AFDEAI+ELD+L EESY DSTLIMQLLR
Sbjct:    1 MSSSREENVYLAKLAEQAERYEEMVEFMEKVAKTVDTDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIKDYRGKIETELSKICDGILNLLDSHLVPTASLAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLVAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLR 228          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14331_ARATH (14-3-3-like protein GF14 chi OS=Arabidopsis thaliana GN=GRF1 PE=1 SV=3)

HSP 1 Score: 303.138 bits (775), Expect = 9.790e-82
Identity = 153/224 (68.30%), Postives = 184/224 (82.14%), Query Frame = 3
Query:   66 REHHVYLARLAEQAERYDEMVEAMKKVAKL--DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            R+  VY+A+LAEQAERY+EMVE M+KVAK     ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I++YR ++E EL+ IC+ IL ++D  L+P++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           SEL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIAELD+L EESY DSTLIMQLLR
Sbjct:   10 RDEFVYMAKLAEQAERYEEMVEFMEKVAKAVDKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSLIRDYRSKIETELSDICDGILKLLDTILVPAAASGDSKVFYLKMKGDYHRYLAEFKSGQERKDAAEHTLTAYKAAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 233          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14332_ARATH (14-3-3-like protein GF14 omega OS=Arabidopsis thaliana GN=GRF2 PE=1 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.279e-81
Identity = 156/228 (68.42%), Postives = 186/228 (81.58%), Query Frame = 3
Query:   54 MEKEREHHVYLARLAEQAERYDEMVEAMKKV-AKLDV-ELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            M   RE  VY+A+LAEQAERY+EMVE M+KV A +D  ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GN+ +V  I+EYR ++E EL+ IC+ IL ++D  LIP++ SG+S VFY KMKGDY+RYLAEFK   +RK+AA+H+L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIAELD+L EESY DSTLIMQLLR
Sbjct:    1 MASGREEFVYMAKLAEQAERYEEMVEFMEKVSAAVDGDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVTAIREYRSKIETELSGICDGILKLLDSRLIPAAASGDSKVFYLKMKGDYHRYLAEFKTGQERKDAAEHTLAAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 228          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14336_SOLLC (14-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 PE=2 SV=2)

HSP 1 Score: 302.368 bits (773), Expect = 1.670e-81
Identity = 157/229 (68.56%), Postives = 183/229 (79.91%), Query Frame = 3
Query:   54 MEKEREHHVYLARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            M   RE +VY+A+LAEQAERY+EMVE M+KV   A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL  ICN IL ++D  LI S+ +G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIAELD+L EESY DSTLIMQLLR
Sbjct:    1 MASPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 229          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14335_SOLTU (14-3-3-like protein 16R OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.670e-81
Identity = 157/229 (68.56%), Postives = 183/229 (79.91%), Query Frame = 3
Query:   54 MEKEREHHVYLARLAEQAERYDEMVEAMKKV---AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            M   RE +VY+A+LAEQAERY+EMVE M+KV   A    ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IKEYR ++E EL  ICN IL ++D  LI S+ +G+S VFY KMKGDY+RYLAEFK   +RKEAA+++L           +EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIAELD+L EESY DSTLIMQLLR
Sbjct:    1 MASPREENVYMAKLAEQAERYEEMVEFMEKVVAAADGAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKEYRSKIESELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAENTLSAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLR 229          
BLAST of FC931800 vs. ExPASy Swiss-Prot
Match: 14332_SOLTU (14-3-3-like protein RA215 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.670e-81
Identity = 154/227 (67.84%), Postives = 183/227 (80.62%), Query Frame = 3
Query:   54 MEKEREHHVYLARLAEQAERYDEMVEAMKKV-AKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKTAFDEAIAELDSLNEESYXDSTLIMQLLR 731
            M   RE +VY+A +A +AERY+EMVE M+KV A LD ELTVEERNL+SV YKNVIGARRASWRI+SSIEQKEE++GNE +V  IK+YR ++E+EL  ICN IL ++D  LI S+ +G+S VFY KMKGDYYRYLAEFK   +RKEAA+++L            EL PTHPIRLGLALNFSVFYYEILNSP+RAC+LAK AFDEAIA++D+L EESY DSTLIMQLLR
Sbjct:    1 MASPREENVYMANVAARAERYEEMVEFMEKVVAALDTELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVASIKKYRSQIENELTSICNGILKLLDSKLIGSAATGDSKVFYLKMKGDYYRYLAEFKTGTERKEAAENTLSAYKSAQDIANGELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIADVDTLGEESYKDSTLIMQLLR 227          
The following BLAST results are available for this feature:
BLAST of FC931800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
14332_MAIZE1.973e-8269.0314-3-3-like protein GF14-12 OS=Zea mays GN=GRF2 PE... [more]
14332_SOLLC2.576e-8269.2014-3-3 protein 2 OS=Solanum lycopersicum GN=TFT2 P... [more]
BMH1_YEAST3.365e-8269.60Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]
1433_PEA4.395e-8270.0914-3-3-like protein OS=Pisum sativum PE=2 SV=1[more]
14337_ARATH5.740e-8268.4214-3-3-like protein GF14 nu OS=Arabidopsis thalian... [more]
14331_ARATH9.790e-8268.3014-3-3-like protein GF14 chi OS=Arabidopsis thalia... [more]
14332_ARATH1.279e-8168.4214-3-3-like protein GF14 omega OS=Arabidopsis thal... [more]
14336_SOLLC1.670e-8168.5614-3-3 protein 6 OS=Solanum lycopersicum GN=TFT6 P... [more]
14335_SOLTU1.670e-8168.5614-3-3-like protein 16R OS=Solanum tuberosum PE=2 ... [more]
14332_SOLTU1.670e-8167.8414-3-3-like protein RA215 OS=Solanum tuberosum PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34201C12EF PostHarveN Citrus clementina cDNA clone C34201C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931800 ID=FC931800; Name=FC931800; organism=Citrus clementina; type=EST; length=731bp
GGAGAGAGAGAAGGAAGAGAGCTAGCGAGAAAAAGAGTGAGTGACTGAAC
GAAATGGAGAAGGAGAGAGAGCATCATGTTTACTTGGCCAGACTTGCTGA
GCAAGCCGAGAGATACGACGAGATGGTTGAAGCCATGAAGAAAGTTGCCA
AGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGTCTGTTGGG
TACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATTTTGTCTTC
CATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGTGAAGAGGA
TTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGATCTGTAAT
GATATATTGTCTGTCATTGATGAACACCTAATCCCATCCTCCACATCTGG
AGAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTACCGTTACC
TAGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAGATCATTCA
CTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAGTTACCCCC
AACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGTTTTCTACT
ATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTAAAACAGCA
TTTGATGAGGCGATTGCTGAACTTGATAGCCTTAATGAAGAGTCCTACNA
GGACAGCACCCTTATTATGCAGCTTCTTCGG
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