FC931802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_HUMAN (Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens GN=MKRN2 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 58/203 (28.57%), Postives = 86/203 (42.36%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDP-PNNICTYYQKGFCSYASRCRYEHVKP---------XXXXXXXXXXXXXXXXXXXXXXGITKVPGAMP-------------ELSALSRPFLPPNKTAWNPESVCNDSLENDEVDEPRNLKPADRS----------------ICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K++ C++F HG C +G C FSHD + P+ IC YYQKG+C+Y +RCRY+H +P I K P LS ++ P+ + NP S C+D + E+ +P + A RS +C +AAAG C G+ C ++HG+ C C LH Sbjct: 3 TKQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHTRPSAAAGGAVGTMAHSVPSPAFHSPHPPSEVTASIVKTNSHEPGKREKRTLVLRDRNLSGMAERKTQPSMVS-NPGS-CSDPQPSPEM-KPHSYLDAIRSGLDDVEASSSYSNEQQLCPYAAAGECRFGDACVYLHGEVCEICRLQVLH 202
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN1_DANRE (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio GN=mkrn1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17 Identity = 53/184 (28.80%), Postives = 79/184 (42.93%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWKDPPNN-ICTYYQKGFCSYASRCRYEHVKP-------------XXXXXXXXXXXXXXXXXXXXXXGITKVP---GAMPELSALSRPFLPPNKTAWNPESVCNDS---LENDEVDEPRNLKPADRSICSFAAAGNCPRGEKCPHIHGDTCPTCGKACLH 687 +K V C++F HG C +GE+C +SHD IC ++QKG C++ RCRYEH KP G + P GA+ ++A F+P + V + L +E ++ + K + +C +AA G C G C ++HGD C CG LH Sbjct: 19 TKHVTCRYFMHGLCKEGENCRYSHDLSSCKQTMICKFFQKGCCAFGDRCRYEHTKPSKQDEVPSSKPSMPLTAAPLAGTPEPVSDGPGGTTGAQEKPQGSGAVDWVNAAE--FVPGQPYCGRADPVLCEGPGPLIEEEYEKEQANKEMKKQLCPYAAVGECRYGLNCAYLHGDVCDMCGLQVLH 200
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_TAKRU (Probable E3 ubiquitin-protein ligase makorin-2 OS=Takifugu rubripes GN=mkrn2 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.346e-13 Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHD-WKDPPNNICTYYQKGFCSYASRCRYEHVK 357 +K+V C++F HG C +G HC+FSHD P+ IC +YQ+G C+Y RCRY+HVK Sbjct: 3 TKQVTCRYFLHGVCREGNHCQFSHDPSSSKPSTICKFYQRGTCAYGERCRYDHVK 57
BLAST of FC931802 vs. ExPASy Swiss-Prot
Match: MKRN2_XENTR (Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus tropicalis GN=mkrn2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.943e-12 Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 1 Query: 196 SKRVLCKFFAHGACLKGEHCEFSHDWK-DPPNNICTYYQKGFCSYASRCRYEHVKP 360 +K V C++F HG C +G C FSHD P+ +C +YQ+G C+Y +RCRY+HVKP Sbjct: 3 TKHVTCRYFLHGVCREGGRCLFSHDLATSKPSTVCRFYQRGQCAYGARCRYDHVKP 58 The following BLAST results are available for this feature:
BLAST of FC931802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931802 ID=FC931802; Name=FC931802; organism=Citrus clementina; type=EST; length=689bpback to top |