FC931803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH-YAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 633 K V +GD +VGKT ++ + +TF Y T+ D S + ++ TV L LWDTAGQE + L P R + V ++ + + +K S+ N KWI ++R+ V ++LVG K DL D +Q ++ +GE K ++ E S+K N+KA+F Sbjct: 8 KLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTI-KWIEDVRNERGNNVVIMLVGNKTDLADKRQ----------VSIEEGEAKAKEYDI-MFTETSAKAGFNIKALF 160
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ S+ AK W+ EL R +P + + L G K DL + + AV AQ + +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR--------AVDFQEAQSYADDNSL---LFMETSAKTSMNVNEIFMAIAK 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ S+ AK W+ EL R +P + + L G K DL + + AV AQ + +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR--------AVDFQEAQSYADDNSL---LFMETSAKTSMNVNEIFMAIAK 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ S+ AK W+ EL R +P + + L G K DL + + AV AQ + +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR--------AVDFQEAQSYADDNSL---LFMETSAKTSMNVNEIFMAIAK 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ S+ AK W+ EL R +P + + L G K DL + + AV AQ + +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR--------AVDFQEAQSYADDNSL---LFMETSAKTSMNVNEIFMAIAK 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ S+ AK W+ EL R +P + + L G K DL + + AV AQ + +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR--------AVDFQEAQSYADDNSL---LFMETSAKTSMNVNEIFMAIAK 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 54/170 (31.76%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIK 648 K V +G+ AVGK+ +++ + F T+ F + V +D +TV +WDTAGQE Y+ L P+ YRGA ++ + + ++ S+ AK W+ EL R +P + + L G K DL + + AV AQ + +++E S+KT NV +F A K Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFAR-AKNWVKELQRQASPNIVIALSGNKADLANKR--------AVDFQEAQSYADDNSL---LFMETSAKTSMNVNEIFMAIAK 179
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB23_MOUSE (Ras-related protein Rab-23 OS=Mus musculus GN=Rab23 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 57/165 (34.55%), Postives = 78/165 (47.27%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 633 IK V VG+GAVGK+ M+ Y F DY T+ D + V+ V L LWDTAGQE+++ + YRGA +L FS + S+E ++ W ++ +P LV K+DL DD I + E L K + Y S K NV VF Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAIS-SWREKVVAEVGDIPTALVQNKIDLLDDS----------CIKNEEAEGLAKRLKLRFY-RTSVKEDLNVSEVF 162
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 50/176 (28.41%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 133 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 S K + +GD VGK+C+L +T F D T+ F ++ V G + L +WDTAGQE + + YRGA L+ + + +++Y +++ W+ + R+ P +IL+G K DL + +T + ++ + G +++E S+KT +NV+ F A K + Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRD----------VTYEEAKQFAEENGL-LFLEASAKTGENVEDAFLEAAKKI 172
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15 Identity = 50/176 (28.41%), Postives = 89/176 (50.57%), Query Frame = 1 Query: 133 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 S K + +GD VGK+C+L +T F D T+ F ++ V G + L +WDTAGQE + + YRGA L+ + + +++Y +++ W+ + R+ P +IL+G K DL + +T + ++ + G +++E S+KT +NV+ F A K + Sbjct: 9 SYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLS-SWLTDARNLTNPNTVIILIGNKADLEAQRD----------VTYEEAKQFAEENGL-LFLEASAKTGENVEDAFLEAAKKI 172 The following BLAST results are available for this feature:
BLAST of FC931803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931803 ID=FC931803; Name=FC931803; organism=Citrus clementina; type=EST; length=654bpback to top |