FC931803
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ + + Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFERLVDAI 183
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ + + Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFERLVDAI 183
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 K + +G+ +VGKT L Y +TF +V TV +F V V L +WDTAGQE Y + YRGA F+L + + ++ S+ N + W +++ Y+ +ILVG K D+ +++ + T +G L + +G + E S+K +V+ F+ + + Sbjct: 24 KLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESF-NAVQDWATQIKTYSWDNAQVILVGNKCDMEEER----------VVPTEKGRLLAEQLGFD-FFEASAKENISVRQAFERLVDAI 183
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB24_MOUSE (Ras-related protein Rab-24 OS=Mus musculus GN=Rab24 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 62/175 (35.43%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 124 MSASRF-IKCVTVGDGAVGKTCMLISYTSNTFPTD-YVPTVFDNFSANVVVDGS-TVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDL--RDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 633 MS R +K V +G VGKT ++ Y + F Y T+ F A V+ G TV LG+WDTAG E Y + + YRGA ++ + L +S+E AK W+ ELR G + L GTK DL D ++ D H ++ I A ++ E SSKT Q+V +F Sbjct: 1 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMCVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFER-AKFWVKELRSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDV--------QDYADNIKAQLF-ETSSKTGQSVDELF 165
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB17_HUMAN (Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14 Identity = 60/176 (34.09%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 127 SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPG-VPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEEL---RKLIGAPVYIECSSKTQQNVKAVFD 636 S R K V +G G+VGK+ + + Y N F + +PTV F VV G+T + L +WDTAGQE Y+ + L +RGA+ LL + + K S+ A++W+ +L PG V ++LVG K DL +++ +T +G+E +KL+ ++E S+K V VF+ Sbjct: 15 SQPRVFKLVLLGSGSVGKSSLALRYVKNDFKS-ILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLK-AQQWLKDLEEELHPGEVLVMLVGNKTDLSQERE----------VTFQEGKEFADSQKLL----FMETSAKLNHQVSEVFN 174
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 1 Query: 133 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDL-------RDDKQFLADHHGAVPITTAQGE 555 S K V +GD VGK+ +L +T N F D T+ F+ ++ ++G T+ +WDTAGQE Y + YRGA LL + + + S++NV +W+ ELR +A + +++VG K DL D+ + LA+ G + T+ E Sbjct: 10 SYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNV-HRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAME 158
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RB27A_RAT (Ras-related protein Rab-27A OS=Rattus norvegicus GN=Rab27a PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 56/184 (30.43%), Postives = 85/184 (46.20%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVV-----------DGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR--HYAPGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAIKVV 654 IK + +GD VGKT +L YT F + ++ TV +F VV G ++L LWDTAGQE + L +R A FLL F L ++ S+ NV + WI +L+ Y ++L G K DL D + + + EL + G P Y E S+ N+ + + ++ Sbjct: 10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGTVGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNV-RNWISQLQMHAYCENPDIVLCGNKSDLEDQR----------AVKEEEARELAEKYGIP-YFETSAANGTNISQAIEMLLDLI 181
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 50/169 (29.59%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 145 KCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSAN-VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVFDAAI 645 K V +GD AVGK+ +L + N F D T+ F +V+D TV +WDTAGQE Y + YRGA +L + + + +++++ +W+ ELR++A + +IL+G K DL + + + T +E + G ++E S+ NV++ F + Sbjct: 19 KVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHI-PRWLEELRNHADKNIVIILIGNKCDLVNQRD----------VPTEDAKEFAEKEGL-FFLETSALEATNVESAFTTVL 175
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB24_HUMAN (Ras-related protein Rab-24 OS=Homo sapiens GN=RAB24 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 62/175 (35.43%), Postives = 87/175 (49.71%), Query Frame = 1 Query: 124 MSASRF-IKCVTVGDGAVGKTCMLISYTSNTFPTD-YVPTVFDNFSANVVVDGS-TVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPMILVGTKLDL--RDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 633 MS R +K V +G VGKT ++ Y + F Y T+ F A V+ G TV LG+WDTAG E Y + + YRGA ++ + L +S+E AK W+ ELR G + L GTK DL D ++ D H ++ I A ++ E SSKT Q+V +F Sbjct: 1 MSGQRVDVKVVMLGKEYVGKTSLVERYVHDRFLVGPYQNTIGAAFVAKVMSVGDRTVTLGIWDTAGSERYEAMSRIYYRGAKAAIVCYDLTDSSSFER-AKFWVKELRSLEEGCQIYLCGTKSDLLEEDRRRRRVDFHDV--------QDYADNIKAQLF-ETSSKTGQSVDELF 165
BLAST of FC931803 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 1.459e-14 Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 1 Query: 142 IKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPMILVGTKLDLRDDKQFLADHHGAVPITTAQGEELRKLIGAPVYIECSSKTQQNVKAVF 633 ++ + +G VGKT ++ +T +TF TV +F V + G + L +WDTAGQE +N + YR A +L + + K +++++ KW+ + YA ++LVG KLD D++ IT QGE+ + I + E S+K NV +F Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDL-PKWMKMIDKYASEDAELLLVGNKLDCETDRE----------ITRQQGEKFAQQITGMRFCEASAKDNFNVDEIF 197 The following BLAST results are available for this feature:
BLAST of FC931803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931803 ID=FC931803; Name=FC931803; organism=Citrus clementina; type=EST; length=654bpback to top |