FC931810

Overview
NameFC931810
Unique NameFC931810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_RHOSR (S-adenosylmethionine synthetase OS=Rhodococcus sp. (strain RHA1) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.072e-50
Identity = 115/208 (55.29%), Postives = 137/208 (65.87%), Query Frame = 3
Query:   96 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGV-HGHLSKRPE----EI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            LFTSESV EGHPDK+CD ISD+ILDA L  DP ++VA ET   T  V V GE+TT A  +  KIVRDT   IG+ S   G D ++C V V I  QSP+IAQGV H H  +  E    EI   GAGDQG MFG+AT +TPE MPL   LA +L  +LTEVRK+G  P+LRPDGKTQVT+EY  +      VR+ TV+ISTQH   +  D
Sbjct:    8 LFTSESVTEGHPDKICDAISDSILDALLTDDPRARVAVETLVTTGQVHVAGEVTTSAYADIPKIVRDTVLEIGYDSSAKGFDGNSCGVNVAIGAQSPEIAQGVDHSHEVRTGELSDDEIDRQGAGDQGLMFGFATTDTPELMPLPIALAHRLSRRLTEVRKSGVLPYLRPDGKTQVTIEYDGDKA----VRLDTVVISTQHAADIDLD 211          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_DESAD (S-adenosylmethionine synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.072e-50
Identity = 104/198 (52.53%), Postives = 132/198 (66.67%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV 686
            + FTSESV EGHPDK+ DQISD+ILDA L QD D++VACET   T +  + GEI+T    ++++IVRDT R IG+V  D+G DAD C V+  I++QS DIAQGV       PE  GAGDQG MFG+A  ET   MP     A +L  KLTEVRK+ T  +LRPDGKT+V  EY +      PVR+  V+I+ QHD+ +
Sbjct:    8 YFFTSESVTEGHPDKVADQISDSILDAILAQDKDARVACETLVTTGMAFIAGEISTTGYADFQQIVRDTIREIGYVHSDMGFDADTCAVISSIDKQSVDIAQGVD---RNTPESQGAGDQGMMFGFACKETEALMPAPIYYAHKLSRKLTEVRKDATLDYLRPDGKTEVAFEYLDGK----PVRIADVVIAAQHDDGI 198          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_BURVG (S-adenosylmethionine synthetase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=metK PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.072e-50
Identity = 105/194 (54.12%), Postives = 134/194 (69.07%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 674
            + FTSESV+EGHPDK+ DQISDAILDA LEQD  S+VA ET   T LV++ GEITT AN++Y +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DETPE MPL   L+ +L  +   +R++G  PWLRPD K+QVT+ Y +      P  + TV++STQH
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQ-GAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLPWLRPDAKSQVTIRYVDGK----PDSIDTVVLSTQH 193          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRZT (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRZP (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain P1031) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRR6 (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRPS (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain CGSP14) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRPN (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRPJ (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRPI (S-adenosylmethionine synthetase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metK PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 113/210 (53.81%), Postives = 141/210 (67.14%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRP-------EEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A+   V   + +QSPDIAQGV+  L  R        + IGAGDQG MFG+A DET E MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAKDPEAHVAAETAVYTGSVHVFGEISTNAYVDINRVVRDTIAEIGYTNTEYGFSAETVGVHPSLVEQSPDIAQGVNEALEVRGNADQDPLDLIGAGDQGLMFGFAVDETEELMPLPIALSHKLVRRLAELRKSGEISYLRPDAKSQVTVE-YDENDR--PVRVDTVVISTQHDPEATNE 209          
The following BLAST results are available for this feature:
BLAST of FC931810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_RHOSR1.072e-5055.29S-adenosylmethionine synthetase OS=Rhodococcus sp.... [more]
METK_DESAD1.072e-5052.53S-adenosylmethionine synthetase OS=Desulfovibrio s... [more]
METK_BURVG1.072e-5054.12S-adenosylmethionine synthetase OS=Burkholderia vi... [more]
METK_STRZT1.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRZP1.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRR61.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPS1.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPN1.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPJ1.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_STRPI1.400e-5053.81S-adenosylmethionine synthetase OS=Streptococcus p... [more]

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Properties
Property NameValue
Genbank descriptionC34201D10EF PostHarveN Citrus clementina cDNA clone C34201D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931810 ID=FC931810; Name=FC931810; organism=Citrus clementina; type=EST; length=695bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGAT
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