FC931810

Overview
NameFC931810
Unique NameFC931810
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STRU0 (S-adenosylmethionine synthetase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 110/209 (52.63%), Postives = 141/209 (67.46%), Query Frame = 3
Query:   87 ETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEE------IGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTND 695
            E  LFTSESV+EGHPDK+ DQISDAILDA L +DP++ VA ET   T  V VFGEI+T A V+  ++VRDT   IG+ + + G  A++  V   + +QS DIAQGV+  L  R  +      IGAGDQG MFG+A DETPE MPL   L+ +L  KL ++RK+G   +LRPD K+QVTVEY + +    PVRV TV+ISTQHD  V+ +
Sbjct:    3 ERKLFTSESVSEGHPDKIADQISDAILDAILAEDPEAHVAAETVVYTGSVHVFGEISTSAYVDINRVVRDTIAEIGYTNAEYGFSANSVGVHPSLVEQSTDIAQGVNEALEAREGQKDDLNLIGAGDQGLMFGFAIDETPELMPLPISLSHKLVKKLADLRKSGDITYLRPDAKSQVTVEYDDND---QPVRVDTVVISTQHDPEVSQE 208          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STAES (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 106/204 (51.96%), Postives = 137/204 (67.16%), Query Frame = 3
Query:   96 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV 686
            LFTSESV EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T ++IG+     G D+    VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYATDET  +MPL   L+ QL  +L +VRK+    +LRPDGK QVTVEY  ++    P R+ T+++STQH E V
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATDETDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEYGEDD---KPRRIDTIVVSTQHAEDV 207          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_STAEQ (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 106/204 (51.96%), Postives = 137/204 (67.16%), Query Frame = 3
Query:   96 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKR----PEEI---GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETV 686
            LFTSESV EGHPDK+ DQ+SDAILD  L+ DP+++VACET   T + ++ GEI+T   V+  K+VR+T ++IG+     G D+    VL  I++QSPDIAQGV   L  R     EEI   GAGDQG MFGYATDET  +MPL   L+ QL  +L +VRK+    +LRPDGK QVTVEY  ++    P R+ T+++STQH E V
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATDETDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEYGEDD---KPRRIDTIVVSTQHAEDV 207          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 105/199 (52.76%), Postives = 135/199 (67.84%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 689
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T LV++ GEITT ANV+Y ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV    S      GAGDQG MFGYA DETPE MP     + +L  + +++R++G  PWLRPD K+QVTV Y +      P  V TV++STQH   +T
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV-DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYSHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVDGR----PHSVDTVVLSTQHAPDIT 198          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_POLSQ (S-adenosylmethionine synthetase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 103/199 (51.76%), Postives = 138/199 (69.35%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 689
            + FTSESV+EGHPDK+ DQISDAILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MP+   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDAILDAILAQDPTARVAAETLCNTGLVVLAGEITTHANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETSELMPMPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEEIS 198          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_POLNS (S-adenosylmethionine synthetase OS=Polynucleobacter necessarius (strain STIR1) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 103/199 (51.76%), Postives = 138/199 (69.35%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 689
            + FTSESV+EGHPDK+ DQISD+ILDA L QDP ++VA ET   T LV++ GEITT ANV+Y ++ R+T R IG+ + D G+D   C VLV  ++QSPDIAQGV        ++ GAGDQG MFGYA DET E MPL   L+ +L  + +++R++G   WLRPD K+QVT+ Y +      P  + TV++STQHDE ++
Sbjct:    5 YFFTSESVSEGHPDKVADQISDSILDAILAQDPTARVAAETLCNTGLVVLAGEITTNANVDYIQVARNTLREIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDKAHDDGLDQ-GAGDQGLMFGYACDETAELMPLPIHLSHRLVERQSQLRRDGRLNWLRPDAKSQVTLRYVDGK----PDSIDTVVLSTQHDEDIS 198          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_MYCA1 (S-adenosylmethionine synthetase OS=Mycobacterium avium (strain 104) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 112/203 (55.17%), Postives = 134/203 (66.01%), Query Frame = 3
Query:   96 LFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKI---VRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEI-------GAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH 674
            LFTSESV EGHPDK+CD ISD++LDA L QDP S+VA ET   T  V V GE+TT A   +  I   VR+   +IG+ S D G D  +C V + I  QSPDIAQGV      R E         GAGDQG MFGYA ++TPE MPL   LA +L  +LTEVRKNG  P+LRPDGKTQVT+E+ ++    VPVR+ TV+ISTQH
Sbjct:    7 LFTSESVTEGHPDKICDAISDSVLDALLAQDPRSRVAVETLVTTGQVHVVGEVTTTAKEAFADITNTVRERILDIGYDSSDKGFDGASCGVNIGIGAQSPDIAQGVDTAHETRVEGAADPLDAQGAGDQGLMFGYAINDTPERMPLPIALAHRLSRRLTEVRKNGVLPYLRPDGKTQVTIEFEDD----VPVRLDTVVISTQH 205          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_LEPIN (S-adenosylmethionine synthetase OS=Leptospira interrogans GN=metK PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 105/204 (51.47%), Postives = 138/204 (67.65%), Query Frame = 3
Query:   81 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTN 692
            +++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP S+VACET   TNLV++ GEIT+K  V+ ++I R+  R+IG+    +G DAD   V  ++  QSPDI+QGV        E+ GAGDQG MFG+A +ETPE MP+    + +L   L  +R      +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+
Sbjct:    2 SLKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ-GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTH 200          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 105/204 (51.47%), Postives = 138/204 (67.65%), Query Frame = 3
Query:   81 NMETFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTN 692
            +++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP S+VACET   TNLV++ GEIT+K  V+ ++I R+  R+IG+    +G DAD   V  ++  QSPDI+QGV        E+ GAGDQG MFG+A +ETPE MP+    + +L   L  +R      +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+
Sbjct:    2 SLKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ-GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTH 200          
BLAST of FC931810 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 102/199 (51.26%), Postives = 134/199 (67.34%), Query Frame = 3
Query:   93 FLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCTKTNLVMVFGEITTKANVNYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLSKRPEEIGAGDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVT 689
            + FTSESV EGHPDK+ DQISDA+LD  L QDP+S+VACET   T + ++ GEITT+   +   +VR+T RNIG+ S ++G D   C V+  I++QS DIAQGV    +   E+ GAGDQG MFG+A DET   MP     A QL  +LTEVRK+GT    RPDGKTQV+ EY +      PVR++ V++STQH ++ +
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVDRATN---EDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSAS 199          
The following BLAST results are available for this feature:
BLAST of FC931810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRU01.185e-4952.63S-adenosylmethionine synthetase OS=Streptococcus u... [more]
METK_STAES1.185e-4951.96S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAEQ1.185e-4951.96S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_RALEJ1.185e-4952.76S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_POLSQ1.185e-4951.76S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_POLNS1.185e-4951.76S-adenosylmethionine synthetase OS=Polynucleobacte... [more]
METK_MYCA11.185e-4955.17S-adenosylmethionine synthetase OS=Mycobacterium a... [more]
METK_LEPIN1.185e-4951.47S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LEPIC1.185e-4951.47S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_DESVV1.185e-4951.26S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]

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Properties
Property NameValue
Genbank descriptionC34201D10EF PostHarveN Citrus clementina cDNA clone C34201D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931810 ID=FC931810; Name=FC931810; organism=Citrus clementina; type=EST; length=695bp
ATTCCCCCCCTCTATTTCCTCTTTCTCTGGTCAGCTTTCTCTCAATTCTA
GATCTACCCGGTTCGCAGTTTTTGAAGAAAAATATGGAGACTTTTTTGTT
CACTTCAGAATCTGTGAACGAGGGTCATCCAGACAAGCTCTGTGATCAGA
TCTCCGATGCCATTCTCGATGCTTGTCTCGAACAAGACCCAGATAGCAAG
GTGGCTTGTGAAACCTGTACCAAGACTAACTTGGTTATGGTTTTTGGAGA
GATCACAACCAAAGCTAATGTTAATTACGAGAAAATTGTTCGTGACACTT
GCCGCAACATTGGATTTGTCTCTGATGATGTGGGTTTGGATGCTGATAAC
TGTAAGGTTTTGGTTTACATTGAGCAACAAAGCCCTGATATCGCCCAGGG
CGTTCATGGTCATTTGTCTAAACGCCCCGAGGAAATCGGTGCTGGTGATC
AGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATTTATGCCT
CTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCGAGGTTCG
AAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACACAAGTTA
CTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAGAGTTCAC
ACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATGAT
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