FC931831

Overview
NameFC931831
Unique NameFC931831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_BURPP (NADH-quinone oxidoreductase subunit B OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=nuoB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.021e-48
Identity = 88/122 (72.13%), Postives = 99/122 (81.15%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGC
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_BURP8 (NADH-quinone oxidoreductase subunit B OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=nuoB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.021e-48
Identity = 88/122 (72.13%), Postives = 99/122 (81.15%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            FV +  D ++N+ R GS+WPM+FGLACCAVEMMH GAARYDLDRFG++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVD+YVPGC
Sbjct:   11 FVTTTADKLINWTRTGSLWPMTFGLACCAVEMMHAGAARYDLDRFGVVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_VESOH (NADH-quinone oxidoreductase subunit B OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 88/122 (72.13%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            FV   LD V+N+ R GS+WPM+FGLACCAVEMM  G++RYDLDRFGI+FRP+PRQSD+M+VAGTLTNKMAPALRKVYDQMP+P+WVISMGSCAN              CDRIVPVDIYVPGC
Sbjct:   11 FVTMSLDRVINWARTGSLWPMTFGLACCAVEMMEAGSSRYDLDRFGIVFRPTPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPKWVISMGSCANGGGYYHYSYAVIRGCDRIVPVDIYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_NITEU (NADH-quinone oxidoreductase subunit B OS=Nitrosomonas europaea GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            FV + LD ++N+ R GS+WPM+FGLACCAVEMM TGA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGC
Sbjct:   11 FVTTSLDSLINWGRTGSMWPMTFGLACCAVEMMQTGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_NITEC (NADH-quinone oxidoreductase subunit B OS=Nitrosomonas eutropha (strain C91) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            FV + LD ++N+ R GS+WPM+FGLACCAVEMM TGA+RYDLDRFGI+FRPSPRQSDVM+VAGTL NKMAPALRKVYDQM +PRWVISMGSCAN              CDRIVPVDIYVPGC
Sbjct:   11 FVTTNLDSLINWGRTGSMWPMTFGLACCAVEMMQTGASRYDLDRFGIVFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMAEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPL (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila (strain Lens) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 89/122 (72.95%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGC
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPH (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 89/122 (72.95%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGC
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPC (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila (strain Corby) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 89/122 (72.95%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGC
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_LEGPA (NADH-quinone oxidoreductase subunit B OS=Legionella pneumophila (strain Paris) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.333e-48
Identity = 89/122 (72.95%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            F ++ ++ +V + R GS+WPM+FGLACCAVEMMH GAARYDLDRFGIIFRPSPRQSDVM+VAGTL NKMAPALRKVYDQMP+PRWVISMGSCAN              CDRIVPVD+YVPGC
Sbjct:   11 FELTTVEKLVGWARSGSMWPMTFGLACCAVEMMHVGAARYDLDRFGIIFRPSPRQSDVMIVAGTLCNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGC 132
[Close]
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_STRMK (NADH-quinone oxidoreductase subunit B OS=Stenotrophomonas maltophilia (strain K279a) GN=nuoB PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.274e-48
Identity = 86/122 (70.49%), Postives = 100/122 (81.97%), Query Frame = 3 
Query:  336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701
            FV + +D ++N+ R GS+WPM+FGLACCAVEMMH GAAR DLDR+G++FRPSPRQSDVM+VAGTL NKMAPALRKVYDQMPDP+WVISMGSCAN              CDR+VPVD+YVPGC
Sbjct:   37 FVTTSVDALLNWARTGSMWPMTFGLACCAVEMMHAGAARLDLDRYGVVFRPSPRQSDVMIVAGTLVNKMAPALRKVYDQMPDPKWVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGC 158
The following BLAST results are available for this feature:
BLAST of FC931831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NUOB_BURPP1.021e-4872.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_BURP81.021e-4872.13NADH-quinone oxidoreductase subunit B OS=Burkholde... [more]
NUOB_VESOH1.333e-4872.13NADH-quinone oxidoreductase subunit B OS=Vesicomyo... [more]
NUOB_NITEU1.333e-4873.77NADH-quinone oxidoreductase subunit B OS=Nitrosomo... [more]
NUOB_NITEC1.333e-4873.77NADH-quinone oxidoreductase subunit B OS=Nitrosomo... [more]
NUOB_LEGPL1.333e-4872.95NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_LEGPH1.333e-4872.95NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_LEGPC1.333e-4872.95NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_LEGPA1.333e-4872.95NADH-quinone oxidoreductase subunit B OS=Legionell... [more]
NUOB_STRMK2.274e-4870.49NADH-quinone oxidoreductase subunit B OS=Stenotrop... [more]

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Properties
Property NameValue
Genbank descriptionC34201F08EF PostHarveN Citrus clementina cDNA clone C34201F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931831 ID=FC931831; Name=FC931831; organism=Citrus clementina; type=EST; length=701bp
GGTAACCACCACTTTCAAACCCCAACAACAATCAATTTCTCTCTCGCTTT
GCCCCCGTGTGAGAAAACTAAACCAAACCAAACCAAACCCCACCCCACAA
CCCCCAAAACACAAGCCCAAAAAAAAAAAAAAAAACTATGGCGGTACTCA
CCAAAAACACTGCCACGCGCCTCCCTCTCCTCCTCTCGCAACGCGCCGCC
TGTCTCCACACGACCGTCCCCTCTCTCTCCTCGGCCTCCGGCTCCTCCTC
CTCCTTCTCCTCGCAGCCCACCTCCTACGCTCGCCCTCCACCGCCCTCGA
CCACAAGTCCAGGCGGTATCTCAAAGACGGCGGAATTCGTGATCTCTAAA
TTGGATGATGTCGTCAACTATATTCGTCGCGGCTCCATCTGGCCCATGTC
CTTCGGGCTGGCCTGCTGCGCCGTCGAGATGATGCACACCGGTGCTGCTC
GTTACGATTTAGATCGATTCGGTATCATTTTCAGGCCCAGCCCTCGCCAA
TCCGATGTCATGGTCGTAGCTGGCACACTCACAAACAAGATGGCCCCTGC
CCTTCGCAAGGTTTATGATCAAATGCCAGATCCTAGGTGGGTCATTTCTA
TGGGAAGCTGTGCAAATGGTGGTGGATATTATCATTACTCTTACTCTGTT
GTTCGGGGTTGCGATAGGATTGTCCCCGTGGACATCTATGTTCCGGGCTG
C
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