FC931831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB1_NITOC (NADH-quinone oxidoreductase subunit B 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=nuoB1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 56/122 (45.90%), Postives = 87/122 (71.31%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 + ++L D+V + R+ S+WP +FGL+CC VEM+ + ++YD+ RFG + R +PR++D+MV++GT+ KMAP ++++Y+QM +PRWVISMGSCAN D+ +PVD+YVPGC Sbjct: 30 LFAQLQDLVAWGRKNSLWPYNFGLSCCYVEMVTSFTSKYDIARFGAEVIRATPREADLMVISGTVFIKMAPVIKRLYEQMMEPRWVISMGSCAN-SGGMYDIYSVVQGVDKFLPVDVYVPGC 150
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK_SYNS3 (NAD(P)H-quinone oxidoreductase subunit K OS=Synechococcus sp. (strain CC9311) GN=ndhK PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 53/122 (43.44%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ LDD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++VAGT+T KM PAL ++Y+QMP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 43 ILTSLDDLHNWARLSSLWPLLYGTACCFIEFAALLGSRFDFDRFGLVPRSSPRQADLLIVAGTVTMKMGPALVRLYEQMPEPKYVIAMGACTITGGMFSADSTTAVRGVDKLIPVDLYLPGC 164
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK_CYAA5 (NAD(P)H-quinone oxidoreductase subunit K OS=Cyanothece sp. (strain ATCC 51142) GN=ndhK PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 52/122 (42.62%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ +DD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL ++Y++MPDP++VI+MG+C D+++PVD+Y+PGC Sbjct: 38 ILTTVDDLHNWARLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLIITAGTITMKMAPALVRLYEEMPDPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDVYIPGC 159
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK1_CYAP4 (NAD(P)H-quinone oxidoreductase subunit K 1 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ndhK1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.822e-28 Identity = 54/122 (44.26%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ L+DV ++ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL K+Y+QMP+P++VI+MG+C D+++PVDIY+PGC Sbjct: 29 ILTSLNDVYSWCRLSSLWPLMYGTACCFIEFAAMIGSRFDFDRFGLVPRCSPRQADLLITAGTITMKMAPALVKLYEQMPEPKYVIAMGACTITGGMFSTDSPTAVRGVDKLIPVDIYLPGC 150
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUBCD_PELCD (NADH-quinone oxidoreductase subunit B/C/D OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=nuoBCD PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 56/122 (45.90%), Postives = 86/122 (70.49%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ LDD +N+ R+ S+WPM FGL+CC VEMM + R+DL RFG + R +PR++D+MV+AGT KMA ++ +VY++M +P+WVI+MGSCAN ++++PVD+Y+PGC Sbjct: 10 ILTTLDDAINWGRKNSMWPMFFGLSCCFVEMMGSMTPRFDLARFGAEVLRGTPREADLMVIAGTPFKKMAASMLRVYEEMANPKWVIAMGSCAN-SGGMYDVYSVMQGVNQVLPVDVYIPGC 130
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_ENTS8 (NADH-quinone oxidoreductase subunit B OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 59/118 (50.00%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 351 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 L D+VN+ R+ S+WP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D MVVAGT KMAP ++++YDQM +P+WVISMG+CAN D+ +PVD+Y+PGC Sbjct: 46 LHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTPFTKMAPVIQRLYDQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFLPVDVYIPGC 162
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_EDWI9 (NADH-quinone oxidoreductase subunit B OS=Edwardsiella ictaluri (strain 93-146) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 58/118 (49.15%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 351 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 L D+VN+ R+ S+WP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D MVVAGT KMAP ++++Y+QM +P+WVISMG+CAN D+ +PVD+Y+PGC Sbjct: 46 LHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYEQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFIPVDVYIPGC 162
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_DESRM (NADH-quinone oxidoreductase subunit B OS=Desulfotomaculum reducens (strain MI-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 59/132 (44.70%), Postives = 87/132 (65.91%), Query Frame = 3 Query: 312 GGISKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVE-MMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 G +++T + L+ ++N R S+WPM FGLACCA+E +M AR+DL RFG + R SPRQ+DVM+V GT+T K AP + ++Y+QM +P++VI+MGSCA D+++PVD+Y+PGC Sbjct: 37 GEVARTVS--VGPLEKLLNLARANSLWPMGFGLACCAIEGLMAANMARFDLARFGYEVMRASPRQADVMLVCGTVTKKAAPFVVRLYEQMAEPKYVIAMGSCAISGGPFVDSYSVVPGVDKLIPVDVYIPGC 166
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK_SYNP2 (NAD(P)H-quinone oxidoreductase subunit K OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ndhK PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 52/122 (42.62%), Postives = 85/122 (69.67%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ +DD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++VAGT+T KMAPAL ++Y++MP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 34 ILTTVDDLYNWARLSSLWPLLYGTACCFIEFAALLGSRFDFDRFGLVPRSSPRQADLILVAGTVTMKMAPALVRLYEEMPEPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDLYIPGC 155
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK_ANAVT (NAD(P)H-quinone oxidoreductase subunit K OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ndhK PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 53/122 (43.44%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ +DD+ N+ R S+WP+ FG ACC +E +R+D DRFG+I R SPRQ+D+++ AGT+T KMAP L ++Y+QMP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 33 ILTTVDDLYNWARLSSLWPLLFGTACCFIEFAALIGSRFDFDRFGLIPRSSPRQADLIITAGTITMKMAPQLVRLYEQMPEPKYVIAMGACTITGGMFSVDSPTAVRGVDKLIPVDVYLPGC 154 The following BLAST results are available for this feature:
BLAST of FC931831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931831 ID=FC931831; Name=FC931831; organism=Citrus clementina; type=EST; length=701bpback to top |