FC931831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK_ANASP (NAD(P)H-quinone oxidoreductase subunit K OS=Anabaena sp. (strain PCC 7120) GN=ndhK PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 9.931e-28 Identity = 53/122 (43.44%), Postives = 83/122 (68.03%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ +DD+ N+ R S+WP+ FG ACC +E +R+D DRFG+I R SPRQ+D+++ AGT+T KMAP L ++Y+QMP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 33 ILTTVDDLYNWARLSSLWPLLFGTACCFIEFAALIGSRFDFDRFGLIPRSSPRQADLIITAGTITMKMAPQLVRLYEQMPEPKYVIAMGACTITGGMFSVDSPTAVRGVDKLIPVDVYLPGC 154
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_PSYWF (NADH-quinone oxidoreductase subunit B OS=Psychrobacter sp. (strain PRwf-1) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 62/125 (49.60%), Postives = 84/125 (67.20%), Query Frame = 3 Query: 342 ISKLDDVV----NYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 + KL+D+V N+ R+ S+WP +FG +CC VE T A +DL RFG + R SPRQ+DVM+VAGT KMAP ++++Y+QM +P+WVISMGSCAN D+I+PVD+YVPGC Sbjct: 37 MGKLEDMVHASANWGRKNSLWPFNFGTSCCYVEYATTLTAVHDLSRFGAEVIRASPRQADVMIVAGTCFVKMAPVIQRLYEQMLEPKWVISMGSCAN-SGGMYDIYSVVQGVDKIIPVDVYVPGC 160
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_ERWT9 (NADH-quinone oxidoreductase subunit B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 59/118 (50.00%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 351 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 L D+VN+ R+ S+WP +FGL+CC VEM + A +D+ RFG + R SPRQ+D MVVAGT KMAP ++++YDQM +P+WVISMG+CAN D+ +PVD+Y+PGC Sbjct: 46 LHDMVNWGRKNSLWPFNFGLSCCYVEMTTSFTAVHDVARFGSEVIRASPRQADFMVVAGTCFTKMAPVVQRLYDQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFLPVDVYIPGC 162
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_ARCB4 (NADH-quinone oxidoreductase subunit B OS=Arcobacter butzleri (strain RM4018) GN=nuoB PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 59/122 (48.36%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 V ++LD VN+ R S+WPM+FG ACC +E M A+YD+ RFG + R SPRQ+D+++VAGT++ K AP L+K+Y+QM +P+WVISMG+CA D I+PVD YV GC Sbjct: 14 VTTRLDHAVNWGRSYSLWPMAFGTACCGIEFMAVAGAKYDVSRFGAEVVRFSPRQADLLIVAGTISYKQAPILKKIYEQMCEPKWVISMGACA-CSGGFYDNYTTVQGIDEIIPVDEYVAGC 134
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK1_GLOVI (NAD(P)H-quinone oxidoreductase subunit K 1 OS=Gloeobacter violaceus GN=ndhK1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 53/126 (42.06%), Postives = 84/126 (66.67%), Query Frame = 3 Query: 327 TAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 T V++ L+D+ N+ R S+WP+ +G +CC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL +Y+QMP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 20 TNNVVLTTLNDLYNWARLSSVWPLMYGTSCCFIEFAGLIGSRFDFDRFGLVPRASPRQADLIITAGTVTMKMAPALVTLYEQMPEPKYVIAMGACTITGGMFSTDSYTTVRGVDKLIPVDVYIPGC 145
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK1_ACAM1 (NAD(P)H-quinone oxidoreductase subunit K 1 OS=Acaryochloris marina (strain MBIC 11017) GN=ndhK1 PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 52/122 (42.62%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 ++S + D+ ++ R S+WP+ +G ACC +E+ +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL ++Y+QMPDP++VI+MG+C D+++PVD+Y+PGC Sbjct: 24 ILSSVSDLYDWARLSSLWPLMYGTACCFIEIAAMIGSRFDFDRFGLVPRSSPRQADLIITAGTVTMKMAPALVRLYEQMPDPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDVYLPGC 145
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_FLAPJ (NADH-quinone oxidoreductase subunit B OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=nuoB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27 Identity = 59/125 (47.20%), Postives = 84/125 (67.20%), Query Frame = 3 Query: 336 FVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFG---IIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 F +KL+DVV R S+WP+ F +CC +E M T A+ YDL RFG + F SPRQ+D+++V GT++ KMAP LR+VY+QM +PRWVI++G+CA+ D+++PVD+YVPGC Sbjct: 19 FFATKLNDVVGLARANSMWPLPFATSCCGIEFMATMASHYDLARFGSERVSF--SPRQADMLMVMGTISKKMAPILRQVYEQMAEPRWVIAVGACAS-SGGIFDTYSVLQGIDKVIPVDVYVPGC 140
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK_CYAP8 (NAD(P)H-quinone oxidoreductase subunit K OS=Cyanothece sp. (strain PCC 8801) GN=ndhK PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.694e-27 Identity = 51/122 (41.80%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ +DD+ N+ R S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL ++Y++MP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 38 ILTTVDDLHNWARLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLIITAGTITMKMAPALVRLYEEMPEPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDVYIPGC 159
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NDHK1_SYNY3 (NAD(P)H-quinone oxidoreductase subunit K 1 OS=Synechocystis sp. (strain PCC 6803) GN=ndhK1 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27 Identity = 50/122 (40.98%), Postives = 84/122 (68.85%), Query Frame = 3 Query: 339 VISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCA-NXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 +++ +DD+ N+ + S+WP+ +G ACC +E +R+D DRFG++ R SPRQ+D+++ AGT+T KMAPAL ++Y++MP+P++VI+MG+C D+++PVD+Y+PGC Sbjct: 37 ILTTVDDLYNWAKLSSLWPLLYGTACCFIEFAALIGSRFDFDRFGLVPRSSPRQADLIITAGTITMKMAPALVRLYEEMPEPKYVIAMGACTITGGMFSSDSTTAVRGVDKLIPVDVYIPGC 158
BLAST of FC931831 vs. ExPASy Swiss-Prot
Match: NUOB_YERPY (NADH-quinone oxidoreductase subunit B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nuoB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.890e-27 Identity = 57/118 (48.31%), Postives = 82/118 (69.49%), Query Frame = 3 Query: 351 LDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGI-IFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGC 701 + D+VN+ R+ S+WP +FGL+CC VEM+ + A +D+ RFG + R SPRQ+D MVVAGT KMAP ++++Y+QM +P+WVISMG+CAN D+ +PVD+Y+PGC Sbjct: 47 MHDMVNWGRKNSLWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADFMVVAGTCFTKMAPVIQRLYEQMLEPKWVISMGACAN-SGGMYDIYSVVQGVDKFLPVDVYIPGC 163 The following BLAST results are available for this feature:
BLAST of FC931831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931831 ID=FC931831; Name=FC931831; organism=Citrus clementina; type=EST; length=701bpback to top |