FC931833

Overview
NameFC931833
Unique NameFC931833
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: ABKB_DICDI (Probable serine/threonine-protein kinase abkB OS=Dictyostelium discoideum GN=abkB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.558e-12
Identity = 38/128 (29.69%), Postives = 70/128 (54.69%), Query Frame = 3
Query:    3 KNADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAV----DLDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAK 374
            KN+++ ++ F   + + +P V+W++T  ++LT+E++ GV+I+  + LD  G +  ++     + +  QI   GF H+DPHPGNL V    +    L+  D G+  +I    R     L+ ++   DAK
Sbjct:  401 KNSEKMKQLFIGNQQLSIPKVYWNHTTKRILTMEFIHGVRIDNREGLDKLGIDLKELYYLFSDIFAQQIFVHGFLHSDPHPGNLLVRKTPNGKPDLVLLDHGLYKKIDENVRLDFCHLWKSLCLGDAK 528          
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: ADCK1_CHICK (Uncharacterized aarF domain-containing protein kinase 1 OS=Gallus gallus GN=ADCK1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.907e-11
Identity = 36/131 (27.48%), Postives = 72/131 (54.96%), Query Frame = 3
Query:    3 KNADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAV----DLDEA-LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKV 380
            +NA++  +  +N ++++VP ++W+ +  +VL +E++ G ++N+   ++  G + ++I+    + Y   I   GF H DPHPGN+ V    D  +A +I  D G+   +    R     L+ A+ + D K+V
Sbjct:  228 RNAEKVAQMLKNFEFLKVPRIYWELSTRRVLLMEFMEGGQVNDKAYMEKNGIDVNEISRNLGKLYSEMIFVNGFVHCDPHPGNVLVKKCPDSGKAYIILLDHGLYQVLSESFRMDYCRLWLALIKADMKRV 358          
The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
ABKB_DICDI8.558e-1229.69Probable serine/threonine-protein kinase abkB OS=D... [more]
ADCK1_CHICK1.907e-1127.48Uncharacterized aarF domain-containing protein kin... [more]

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Properties
Property NameValue
Genbank descriptionC34201F10EF PostHarveN Citrus clementina cDNA clone C34201F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bp
GAAAAAATGCTGATAGATTCCGTCGAGATTTTCGGAATATAAAGTGGGTC
CGGGTACCTCTGGTGTTTTGGGATTATACTGCTACAAAGGTGTTGACATT
GGAGTATGTACCAGGAGTTAAGATCAATGAGTTGAAAGCACTAGATTTGC
AGGGTTATAATCGTTCTCAAATTGCACCGCGTGCAATTGAAGCGTACTTG
AATCAGATACTCAAAACTGGTTTCTTTCATGCTGATCCTCATCCTGGAAA
TCTTGCTGTCGATTTAGATGAAGCACTCATCTATTATGATTTTGGTATGA
TGGGGGAGATTAAATCCTTTACCCGTGAAAGATTGCTTGATCTTTTCTAT
GCAGTTTATGAGAAAGATGCCAAAAAGGTTATCCAAAGGTTGATTGATCT
CGAAGCACTTCAACCCACAGGAGATATGTCATCGGTAAGGAGATCCGTGC
AATTTTTCTTGGACAATTTGCTAAGCCAGAGTCCAGATCAGCAGCAGACT
TTGGCTGCAATTGGAGAGGATTTGTTTGCAATAGCTCAAGATCAACCATT
TCGGTTTCCATCCACCTTTACTTTCGTTATAAGGGCATTCTCCACACTTG
AAGGTATCGGCAACATTCTTGACCCAGATTTTTCCCTTTGTGAGGTTGCT
GCACCTTATGCACAGGAGCTATTGGATTTAAACAGCAGCAGCAGTCTGGA
ACACAGCTAGTGGAGCAAATCAGAAACAGCTGATGATGCAGATCTTCGAC
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