FC931833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_BURXL (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia xenovorans (strain LB400) GN=ubiB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22 Identity = 62/228 (27.19%), Postives = 113/228 (49.56%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDM----SSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 N + RR+F + + VP ++W++ VL +E + GV I++++ L G + ++A +E + Q+ + GFFHAD HPGN+ V LD A I DFG++G + F + L F A +++D +V ++ + PT + S++R + + D L + +L + LF+ ++ + + +EG+G LDP+ L + A PY + Sbjct: 209 NGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPTTRVEELESAIRAVCEPYFDRAL-----KDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYLE 431
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_BURPP (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=ubiB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22 Identity = 62/228 (27.19%), Postives = 113/228 (49.56%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDM----SSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 N + RR+F + + VP ++W++ VL +E + GV I++++ L G + ++A +E + Q+ + GFFHAD HPGN+ V LD A I DFG++G + F + L F A +++D +V ++ + PT + S++R + + D L + +L + LF+ ++ + + +EG+G LDP+ L + A PY + Sbjct: 209 NGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVMERMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPTTRVEELESAIRAVCEPYFDRAL-----KDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYLE 431
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_BURP8 (Probable ubiquinone biosynthesis protein ubiB OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=ubiB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22 Identity = 62/228 (27.19%), Postives = 112/228 (49.12%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDM----SSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 N + RR+F + + VP ++W+Y VL +E + GV I+++ L + G + ++A +E + Q+ + GFFHAD HPGN+ V LD A I DFG++G + F + L F A +++D +V ++ + T + S++R + + D L + +L + LF+ ++ + + +EG+G LDP+ L + A PY + Sbjct: 209 NGSQLRRNFAGLDLLLVPEMYWEYCTANVLVMERMVGVPISQVDTLRVAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFGRYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPATTRVEELESAIRAVCEPYFDRAL-----KDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELDLWKTAKPYLE 431
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_DIAST (Probable ubiquinone biosynthesis protein ubiB OS=Diaphorobacter sp. (strain TPSY) GN=ubiB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.123e-22 Identity = 61/224 (27.23%), Postives = 111/224 (49.55%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+ + + V +P VFWD+ +VL +E + GV IN+++ L G + ++A + + Q+ + GFFHAD HPGN+ V L I DFG++G + F +E L F A + +D K+V + I+ + ++ + +++ + + P ++ +L + LF ++ + + +EG+G LDPD L A P+ + Sbjct: 210 NAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQVERLRSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPAHTRVNELEAAIRTVCEPYFDR-PLKEISLGMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWSTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_ACIAC (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.123e-22 Identity = 58/224 (25.89%), Postives = 111/224 (49.55%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+ + VR+P + WD+ +VL +E + GV I++++ L G + Q+A + + Q+ + GFFHAD HPGN+ V L+ I DFG++G + F +E L F A + +D K+V + ++ + ++ + +++ + + P ++ +L + LF ++ + + +EG+G LDP+ L A P+ + Sbjct: 210 NAAQLRRNMERLGLVRIPEILWDFCHPEVLVMERMKGVPISQIERLRAAGVDIRQLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLEPGSFGRYISLDFGIVGSLTEFDKEYLAQNFTAFFRRDYKRVAELHVESGWVPADTRINELESAIRAVCEPYFDR-PLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWSTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_ACISJ (Probable ubiquinone biosynthesis protein ubiB OS=Acidovorax sp. (strain JS42) GN=ubiB PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21 Identity = 61/224 (27.23%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+ + + V +P VFWD+ +VL +E + GV IN++ L G + ++A + + Q+ + GFFHAD HPGN+ V L I DFG++G + F +E L F A + +D K+V + I+ + ++ + +++ + + P ++ +L + LF ++ + + +EG+G LDPD L A P+ + Sbjct: 210 NAAQLRRNMQGLDLVLIPEVFWDFCHAEVLVMERMKGVPINQVDRLRSAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIVGTLTEFDKEYLAQNFTAFFRRDYKRVAELHIESGWVPAHTRVNELEAAIRTVCEPYFDR-PLKEISLGMVLLRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWSTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XYLFM (Probable ubiquinone biosynthesis protein ubiB OS=Xylella fastidiosa (strain M12) GN=ubiB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.032e-21 Identity = 61/223 (27.35%), Postives = 109/223 (48.88%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA------LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA +VLTLE + G+ +++ LD G +R ++ + I + Q+ + FFHAD H GN+ VD D A I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P Q +LA + LF +A+ + + +EG+G LDP+ + VA P Sbjct: 208 NASVLRRFWEASDDIYVPEVIWSHTAERVLTLERMYGIPSDDIALLDASGIDRKALSSKGIRVFYTQVFRDNFFHADAHSGNIWVDSDPARKSNPRFIALDFGIMGQLSQKDQYYLAENFMAIFHKDYRRIAELHVEAGWIPQHVRIEELEAAARSVCEPYFTR-PLSQISLAEVLMKLFHVARRYQLTLQPQLILLQKTLLNIEGVGRQLDPELDIWVVARP 429
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_MARAV (Probable ubiquinone biosynthesis protein ubiB OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=ubiB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.528e-21 Identity = 60/224 (26.79%), Postives = 105/224 (46.88%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + +P + WDYT VL +E + G+ I ++ AL+ G N +A + +E + Q+ + FFHAD HPGN+ VD+ D I DFG++G + + L A + +D ++V Q I + P ++ +++ + + + P + + LF A+ + + +EG+G L PD L A P+ + Sbjct: 208 NASQLRRNFENSPLIYIPFIDWDYTRKSVLVMERIHGIPIADVPALEKAGVNMRVLAEKGVEIFFTQVFRDSFFHADMHPGNIFVDVSNPADPKYIAIDFGIVGTLAPDDQSYLARNLLAFFRRDYRQVAQLHIQSGWVPPETRVNEFEAAIRTVCEPIF-ERPLKDISFGHFLLRLFQTARRFNMEVQPQLVLLQKTLLNVEGLGRQLYPDLDLWSTAQPFLE 430
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: Y4139_ARATH (Uncharacterized aarF domain-containing protein kinase At4g31390, chloroplastic OS=Arabidopsis thaliana GN=At4g31390 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.913e-21 Identity = 60/219 (27.40%), Postives = 104/219 (47.49%), Query Frame = 3 Query: 3 KNADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPY 659 +N + F +F++ V++P V+ + +VL +E++ G++ + +A+ G + + + A L Q+L+ G FH DPHPGN+ D + Y DFG + + ++ L+D +D ++ L L D+S + +++ N + + G+ + D P R P F+ VIR+ T EGI L PDF EVA PY Sbjct: 323 RNIEDFLENFKDDPTVKIPGVYKNLCGPRVLVMEWIDGIRCTDPQAIKDAGIDLNGFLTVGVSAALRQLLEFGLFHGDPHPGNIFAMQDGRIAYVDFGNVAVLSQQNKQILIDAVVHAVNEDYGEMANDFTRLGFLAKDTDVSPIVPALEAIWQNSAGKGLADFNFRSVTGQ-FNKLVYDFPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPY 540
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANOR (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas oryzae pv. oryzae GN=ubiB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434 The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bpback to top |