FC931833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANOP (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANOM (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANC5 (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_CHRVO (Probable ubiquinone biosynthesis protein ubiB OS=Chromobacterium violaceum GN=ubiB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21 Identity = 57/218 (26.15%), Postives = 108/218 (49.54%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPY 659 NA + RR+F+ + VP VF+DY++ +VLTLE++ G+ + +++ L G + +++ +E + Q+ + GFFHAD HPGN+ V D I DFG++G + + L F A + +D +V I+ + + +V+ + + + P + + + LF ++ + + +EG+G LDP+ L + A P+ Sbjct: 210 NASQLRRNFKGSDMLIVPEVFYDYSSREVLTLEWMHGIPVGQIERLREAGVDLQKLSRFGVEIFFTQVFRHGFFHADMHPGNIFVAADGRYIALDFGIVGSLTDTDKHYLAVNFLAFFNRDYHRVATAHIESGWVPRDTRAEELEAAVRTVCEPIF-EKPLSEISFGMVLLRLFETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWDTAKPF 426
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANCP (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris GN=ubiB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.009e-20 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDVAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAEVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANCB (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.009e-20 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDVAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERCLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAEVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANC8 (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.009e-20 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDVAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFTR-PLSEISLAEVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPKLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_XANAC (Probable ubiquinone biosynthesis protein ubiB OS=Xanthomonas axonopodis pv. citri GN=ubiB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.009e-20 Identity = 60/223 (26.91%), Postives = 107/223 (47.98%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVD------LDEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAP 656 NA RR + + VP V W +TA + LTLE V G+ +++ LD G +R +A + + + Q+ + FFHAD H GN+ VD L+ I DFG+MG++ + L + F A++ KD +++ + ++ + + + + + + ++ P + +LA + LF +AQ + + +EG+G LDP + VA P Sbjct: 213 NASVLRRFWEGSDDLYVPEVIWSHTAERALTLERVYGIPSDDIAKLDAAGIDRKALAAKGVRVFYTQVFRDNFFHADAHAGNIWVDSDPERRLNPRFIALDFGIMGQLSQEDQYYLAENFMAIFHKDYRRMAELHVEAGWMPSNVRIDELEAAARSVCEPYFNR-PLSEISLAQVLIKLFRVAQRYELTLQPQLILLQKTLLNIEGVGRQLDPRLDIWAVARP 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_DELAS (Probable ubiquinone biosynthesis protein ubiB OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.317e-20 Identity = 56/224 (25.00%), Postives = 111/224 (49.55%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+ + V +P V+WD+ + V+ ++ + GV I++++ L G + ++A + + Q+ + GFFHAD HPGN+ V L+ I DFG++G + + +E L F A + +D K+V + I+ + P+ + + +++ + + P + +L + LF ++ + + +EG+G LDP+ L A P+ + Sbjct: 210 NAAQLRRNMEGLDLVLIPEVYWDFCRSDVMVMQRMTGVPISQVERLREAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIMVSLEPETFGRYISLDFGIVGTLTEYDKEYLAQNFTAFFRRDYKRVAELHIESGWVPPSTRVDELEAAIRAVCEPYFDR-PLAEISLGMVLMRLFQTSRRFQVEIQPQLVLLQKTLLNIEGLGRQLDPNLDLWSTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_ENT38 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sp. (strain 638) GN=ubiB PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.539e-20 Identity = 56/224 (25.00%), Postives = 109/224 (48.66%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VP V+ DY + ++ +E + G+ ++++ AL+ QG N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYVPEVYSDYCSQNMMVMERIYGIPVSDIVALENQGTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPKYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLSEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434 The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bpback to top |