FC931833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_RALSO (Probable ubiquinone biosynthesis protein ubiB OS=Ralstonia solanacearum GN=ubiB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19 Identity = 61/228 (26.75%), Postives = 110/228 (48.25%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL-DEAL---IYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDL----EALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + VP VFWD+ ++V +E + GV+++ L G + ++A +E + Q+ + GFFHAD HPGN+ V + E+L I DFG++G + F + L F A +++D +V ++ E + ++R + + D L + +L + LF ++ + + +EG+G LDPD L + A P+ + Sbjct: 210 NASQLRRNFAKSELLLVPEVFWDWCTSEVFVMERMHGVRVSHADELRAAGVDTHKLARDGVEIFFTQVFRDGFFHADMHPGNILVSVAPESLGRYIALDFGIVGALSEFDKNYLAQNFLAFFQRDYHRVALLHVESGWAPEETRVEELEGAIRACCEPYFDRPLGEI-----SLGLVLMRLFQTSRRFNVEVQPQLVLLQKTLLNVEGLGRQLDPDLDLWKTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP7 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ubiB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19 Identity = 55/224 (24.55%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + VP V+ DY + ++ +E + G+ +++++AL+ QG N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_KLEP3 (Probable ubiquinone biosynthesis protein ubiB OS=Klebsiella pneumoniae (strain 342) GN=ubiB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19 Identity = 55/224 (24.55%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + VP V+ DY + ++ +E + G+ +++++AL+ QG N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFEDSPMLYVPEVYPDYCSESMMVMERIYGIPVSDVEALEAQGTNMQLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_TOLAT (Probable ubiquinone biosynthesis protein ubiB OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=ubiB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.245e-19 Identity = 58/224 (25.89%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VPLV+ DY VL +E + G+ +++ AL+ G + +A R +E + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + + + P + +++ L+ + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 210 NAIQLRRNFENSSHLYVPLVYSDYCRESVLVMERIYGIPVSDRAALEANGTDLKLLAERGVEVFFTQVFRDSFFHADMHPGNVFVSYEHPHDPQWIGIDCGIVGTLNRQDKRYLAENFLAFFNRDYRKVAELHVQSGWVPPDTKVEEFESALRTVLEPIFAK-PLAEISFGQVLLNLFNTARRFNMHVQPQLVLLQKTLLYIEGLGRHLYPQLDLWQTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PHOLL (Probable ubiquinone biosynthesis protein ubiB OS=Photorhabdus luminescens subsp. laumondii GN=ubiB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.238e-19 Identity = 56/224 (25.00%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VP ++ DY VL +E V G+ +++++AL+ Q N +A R ++ + Q+ + FFHAD HPGN+ V D I D+G++G + + L + F A + +D +KV + +D + ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIQLRRNFENSSTLYVPEIYSDYCRENVLVMERVYGIPVSDIEALEAQNTNMRLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPFYIGIDYGIVGSLNKDDKRYLAENFIAFFNRDYRKVAELHVDSGWVPSDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMAVQPQLVLLQKTLLYVEGLGRQLYPQLDLWKTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEHH (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.535e-19 Identity = 54/224 (24.11%), Postives = 111/224 (49.55%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + +P ++ + T+++ +E + G+ +++ AL+ QG N +A R +E + Q+ + FFHAD HPGN+ V D I D G+MG + + L + F A + +D +++ Q I+ + P D+++ ++V+ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFIDSNALYIPYMYEELCFTRLIVMERIDGIPVSDKVALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPLYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYRRIAQLYIESGWVSPDTDVAAFEQAVKVVCEPMFNK-PLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHESW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella sp. (strain W3-18-1) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 53/224 (23.66%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F N + VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFLNSDALYVPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARSFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPC (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 53/224 (23.66%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F N + VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFLNSDALYVPYVYEEFCYPRLMVMERIYGIPVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARSFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PSEP1 (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ubiB PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19 Identity = 57/224 (25.45%), Postives = 105/224 (46.88%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + + VP V+WD KVL +E + GV + ++ L Q + +A R +E + Q+ + FFHAD HPGN+ V I D G++G + + ++ L +A +++D ++V Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L PD L A PY + Sbjct: 213 NASQLRRNFEDSELMYVPQVYWDLCRPKVLVMERIYGVPVTDMATLADQRTDMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSTVKPWSPQYIAIDCGIVGSLTAEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPANTKVNEFEAAIRTVCEPIF-EKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWSTAKPYLE 435
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PROST (Probable ubiquinone biosynthesis protein ubiB OS=Providencia stuartii GN=ubiB PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19 Identity = 56/224 (25.00%), Postives = 106/224 (47.32%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VP V+ DY V+ +E + G+ ++++ AL QG N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 210 NAIQLRRNFENSSMLYVPEVYADYCRENVMVMERIYGIPVSDIAALKAQGTNMKILAERGVKVFFTQVFRDSFFHADMHPGNIFVSYEHPEDPLYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPADTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGLGRQLYPQLDLWKTAKPFLE 432 The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bpback to top |