FC931833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_AZOVD (Probable ubiquinone biosynthesis protein ubiB OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19 Identity = 58/224 (25.89%), Postives = 105/224 (46.88%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + +R+F + VP ++WD+ KVL +E + GV + +L AL QG + +A R +E + Q+ + FFHAD HPGN+ V D I D G++G + ++ L A +++D +KV Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L P+ L A P+ + Sbjct: 213 NASQLKRNFEGSPLLYVPQIYWDWCRPKVLVMERIYGVPVTDLAALVDQGTDLKLLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTRQPWDPQYIAIDCGIVGSLTPQDQDYLARNLLAFFKRDYRKVAQLHIDSGWVPADTQVNEFEAAIRTVCEPIF-EKPLKDISFGQLLLRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPELDLWTTAKPFLE 435
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_VARPS (Probable ubiquinone biosynthesis protein ubiB OS=Variovorax paradoxus (strain S110) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 56/224 (25.00%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+ +++ V +P +FWD+ +V+ +E + GV I +L L G + ++A + + Q+ + GFFHAD HPGN+ V L I DFG++G + +E L F A + +D K+V + ++ + + + +++ + + P ++ +L + LF ++ + + +EG+G LDP+ L A P+ + Sbjct: 210 NAAQLRRNMASLELVLIPEMFWDFCHPEVIVMERMNGVPIAQLDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAELHLESGWVPEGTRIDELEGAIRTVCEPYFDR-PLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWHTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SODGM (Probable ubiquinone biosynthesis protein ubiB OS=Sodalis glossinidius (strain morsitans) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 54/224 (24.11%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + +P V+ DY + ++ +E + GV +N++ AL+ QG N +A R ++ + Q+ + FFH D HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 210 NAIQLRRNFDGSPMLYIPEVYPDYCSETMMVMERIYGVPVNDVAALEKQGTNMKLLAERGVQVFFTQVFRDSFFHGDMHPGNIFVSFEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLE 432
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEWM (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 54/224 (24.11%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + +P ++ + T+++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ V D I D G+MG + + L + F A + +D ++ Q I+ + P D+++ ++V+ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAVKLRNNFLDSGSLYIPYMYEELCFTRLIVMERIEGIPVSDMAALKAQGTNLKVLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPEDPYYIGLDCGIMGTLTEEDKRYLAENFLAFFNRDYHRIAQLYIESGWVSPDTDIAAFEQAVKVVCEPMFNK-PLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEPW (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 55/224 (24.55%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + +P ++ + T+++ +E + GV +++ AL+ QG N +A R +E + Q+ + FFHAD HPGN+ V D I D G+MG + + L + F A + +D +++ Q I+ + D+S+ ++V+ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAIKLRNNFLDSNALYIPYMYEELCFTRLIVMERIDGVPVSDKAALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSREHPNDPFYIGLDCGIMGTLTDEDKRYLAENFLAFFNRDYRRIAQLYIESGWVSADTDISAFEQAVKVVCEPMFNK-PLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_ENTS8 (Probable ubiquinone biosynthesis protein ubiB OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 53/224 (23.66%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VP V+ DY + ++ +E + G+ +N++ AL+ G + +A R ++ + Q+ + FFH D HPGN+ V D I D G++G + + L + F A + +D ++V + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYVPEVYSDYCSPTMMVMERIYGIPVNDVAALEANGTDMKLLAERGVQVFFTQVFRDSFFHGDMHPGNIFVSHDHPHDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRRVAELHVDSGWVPPDTNVEEFESAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_EDWI9 (Probable ubiquinone biosynthesis protein ubiB OS=Edwardsiella ictaluri (strain 93-146) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18 Identity = 58/224 (25.89%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + +P VF DY VL +E + GV ++++ AL Q N +A R ++ + Q+ + FFHAD HPGN+ V D I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P Q + + +LF A+ + + +EG+G L P L A P+ + Sbjct: 211 NAIQLRRNFDASPMLYIPEVFSDYCRESVLVMERIYGVPVSDIAALRAQNTNMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFVSYEHPQDPQYIGIDCGIVGSLNKADKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNIEEFEFAIRTVCEPIF-EKPLDQISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLWTTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_ERWCT (Probable ubiquinone biosynthesis protein ubiB OS=Erwinia carotovora subsp. atroseptica GN=ubiB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18 Identity = 53/224 (23.66%), Postives = 107/224 (47.77%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + VP ++ DY +L +E + G+ ++++ AL G + +A R ++ + Q+ + FFHAD HPGN+ + D I D G++G + + L + F A + +D +KV + +D + P +++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYVPEIYSDYCRESMLVMERIYGIPVSDVDALKANGTDMKLLAERGVQVFFTQVFRDSFFHADMHPGNIFISYDHPEDPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVADFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYIEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_CELJU (Probable ubiquinone biosynthesis protein ubiB OS=Cellvibrio japonicus (strain Ueda107) GN=ubiB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.610e-18 Identity = 56/224 (25.00%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 N + RR+F N + VP V+W+YT T VL +E + G+ + +L AL+ Q + ++A R +E + Q+ + FFHAD HPGN+ V + I D ++G + + L A++ +D ++V + ++ + + + +V+ + + + P ++ + A + +LF A+ + + +EG+G L PD L A P+ + Sbjct: 205 NGSQLRRNFLNSPLLYVPEVYWEYTRTNVLVMERIYGIPVTDLAALNAQQTDMKKLAERGVEIFFTQVFEHNFFHADMHPGNIFVAHEHPSAPQYIAVDMAIVGSLTRADQYYLARNLLAMFRRDYRQVAELHVESGWVPSHVRVEELEAAVRTVCEPIF-EKPLKEISFAQVLLNLFRTARRFEMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWATAHPFLE 427
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SALTY (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella typhimurium GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 53/224 (23.66%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + +P V+ DY + ++ +E + G+ ++++ AL+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434 The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bpback to top |