FC931833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SALDC (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella dublin (strain CT_02021853) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 53/224 (23.66%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + +P V+ DY + ++ +E + G+ ++++ AL+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SALCH (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella choleraesuis GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 53/224 (23.66%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + +P V+ DY + ++ +E + G+ ++++ AL+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SALA4 (Probable ubiquinone biosynthesis protein ubiB OS=Salmonella agona (strain SL483) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 53/224 (23.66%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F N + +P V+ DY + ++ +E + G+ ++++ AL+ G N +A R ++ + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D +KV + +D + P ++ +++ + + + P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 212 NAIQLRRNFENSPMLYIPEVYSDYCSQNMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVKVFFTQVFRDSFFHADMHPGNIFVSHEHPENPQYIGIDCGIVGSLNKEDKRYLAENFIAFFNRDYRKVAELHVDSGWVPPDTNVEDFEFAIRTVCEPIF-EKPLAEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_PSEFS (Probable ubiquinone biosynthesis protein ubiB OS=Pseudomonas fluorescens (strain SBW25) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDL----DEALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + +R+F + VP V+WD+ KVL +E + GV++ +L L Q + +A R +E + Q+ + FFHAD HPGN+ V I D G++G + ++ L +A +++D ++V Q ID + ++ +++ + + + P + + + LF A+ + + +EG+G L PD L A P+ + Sbjct: 212 NASQLKRNFEGSPLLYVPQVYWDWCRPKVLVMERIYGVQVTDLATLADQRTDMKMLAERGVEIFFTQVFRDSFFHADMHPGNIFVSTVNPWSPQYIAIDCGIVGSLTPEDQDYLARNLFAFFKRDYRRVAQLHIDSGWVPAETKLNEFEAAIRTVCEPIF-EKPLKDISFGQVLMRLFQTARRFNMEVQPQLVLLQKTLLNIEGLGRQLYPDLDLWNTAQPFLE 434
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_LEPCP (Probable ubiquinone biosynthesis protein ubiB OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 56/224 (25.00%), Postives = 110/224 (49.11%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+ + + +P + WD ++ +VL +E + GV I++++ L G + ++A + + Q+ + GFFHAD HPGN+ V A I DFG++G + S +E L F A + +D ++V + I+ + + + + +V+ + + P + +L + LF ++ + + +EG+G LDP+ L + A P+ + Sbjct: 206 NAAQLRRNMGGLDLIMLPEMIWDLSSAEVLVMERMHGVPISQIETLRAAGIDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIMVSTAPATFGRYIALDFGIVGTLDSRDKEYLAQNFLAFFRRDYRRVAELHIESGWVPASTRVDELEGAVRAVCEPHFDR-PLKDISLGQVLLRLFQTSRRFNVEIQPQLVLLQKTLLNVEGLGRQLDPELDLWQTAKPFLE 428
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_AERHH (Probable ubiquinone biosynthesis protein ubiB OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 55/224 (24.55%), Postives = 109/224 (48.66%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDE----ALIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + RR+F + + VP VF ++ +VL +E + G+ ++++ AL+ G N +A R +E + Q+ + FFHAD HPGN+ V + I D G++G + + L + F A + +D ++V + ++ + P + +++ L+ + + P + + + +LF A+ + + + +EG+G L P L + A PY + Sbjct: 211 NAIQLRRNFTGSEALYVPEVFTEHCREQVLVMERIYGIPVSDIAALEANGTNMKLLAERGVEVFFTQVFRDSFFHADMHPGNIFVSYEHPENPLWIGIDCGIVGTLNREDKRYLAENFLAFFNRDYRRVAELHVESGWVPPDTKVDEFEFAIRTVLEPIF-EKPLSEISFGHVLLNLFNTARRFNMQVQPQLVLLQKTLLYVEGLGRQLYPQLDLWQTAKPYLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB9 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS195) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 52/224 (23.21%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB8 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS185) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 52/224 (23.21%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB5 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 52/224 (23.21%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433
BLAST of FC931833 vs. ExPASy Swiss-Prot
Match: UBIB_SHEB2 (Probable ubiquinone biosynthesis protein ubiB OS=Shewanella baltica (strain OS223) GN=ubiB PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18 Identity = 52/224 (23.21%), Postives = 108/224 (48.21%), Query Frame = 3 Query: 6 NADRFRRDFRNIKWVRVPLVFWDYTATKVLTLEYVPGVKINELKALDLQGYNRSQIAPRAIEAYLNQILKTGFFHADPHPGNLAVDLDEA----LIYYDFGMMGEIKSFTRERLLDLFYAVYEKDAKKVIQRLIDLEALQPTGDMSSVRRSVQFFLDNLLSQSPDQQQTLAAIGEDLFAIAQDQPFRFPSTFTFVIRAFSTLEGIGNILDPDFSLCEVAAPYAQ 665 NA + R +F + + VP V+ ++ +++ +E + G+ ++++ AL QG N +A R +E + Q+ + FFHAD HPGN+ + D I D G+MG + + L + F A + +D ++ Q I+ + D+ + ++++ + + ++ P + + + +LF A+ + + +EG+G L P L + A P+ + Sbjct: 211 NAVKLRNNFLDSDALYVPYVYEEFCYPRLMVMERIYGISVSDIAALKAQGTNFKLLAERGVELFFTQVFRDNFFHADMHPGNIFISRDHPENPYYIGLDCGIMGTLSEVDKRYLAENFLAFFNRDYHRIAQLYIESGWVSEKTDLQAFEQAIKVVCEPMFNK-PLDEISFGHVLLELFRTARHFDIVVQPQLVLLEKTLLYIEGLGRQLYPQLDLWQTAKPFLE 433 The following BLAST results are available for this feature:
BLAST of FC931833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931833 ID=FC931833; Name=FC931833; organism=Citrus clementina; type=EST; length=750bpback to top |