FC931838

Overview
NameFC931838
Unique NameFC931838
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length699
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.591e-32
Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 3
Query:   93 REENVYMAKLAEQAERYEEMVQYMEKVVASASTGEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRA 665
            RE+ V +AKLAEQAERY++MV++M+ +   A    +++ EER L SV +K  IGARRASWRI+ S+EQ+  + G+Q  V+ I  Y+ K+E EL  +C  +L ++    +P A + ++ VF+ KMKGDY+RYLAEF TG E+K A + +L AY++                   A  FS+   EI+NSP+RA
Sbjct:    4 REKVVRLAKLAEQAERYDDMVEFMKTL---ARMDVDMSAEERLLFSVGFKKTIGARRASWRILESLEQKVTA-GDQPGVT-INGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLFSLL--EIMNSPERA 171          
BLAST of FC931838 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.194e-27
Identity = 68/150 (45.33%), Postives = 83/150 (55.33%), Query Frame = 3
Query:  195 EELTVEERNLLSVAYKNVIGARRASWRIVSSIEQEEESRGNQDHVSVIKEYRSKIEAELTEICGGILKLLDQKLVPAAAAADSKVFYLKMKGDYHRYLAEFKTGDERKVAAENTLNAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEI 644
            E L+ EERNLLSVAYKNV+GARR+SWR++SSIEQ+                                                  FYLKMKGDY+RYLAE  TG++R    E++  AY  A +I+   + PTHPIRLGLALN+SVFYYEI
Sbjct:   12 EPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTS------------------------------------------------FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI 113          
The following BLAST results are available for this feature:
BLAST of FC931838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
14338_ORYSJ6.591e-3242.93Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433G_SHEEP2.194e-2745.3314-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34201G03EF PostHarveN Citrus clementina cDNA clone C34201G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931838 ID=FC931838; Name=FC931838; organism=Citrus clementina; type=EST; length=699bp
GATCAATTCCAAATCGCCCACAAAATCTCCAAAAGAAAACCGAAAGAAAG
AAACAAACACAACTGAACGGAACAATGGCAGCCCCTTCTCCACGGGAAGA
AAACGTATACATGGCGAAACTTGCGGAGCAAGCCGAGCGGTACGAGGAGA
TGGTCCAATACATGGAAAAAGTCGTCGCCTCCGCCTCAACCGGCGAGGAA
CTCACCGTCGAGGAGCGCAACCTCCTCTCCGTCGCCTACAAGAACGTCAT
CGGCGCACGCCGCGCCTCCTGGCGCATCGTGTCCTCCATCGAGCAGGAGG
AGGAGTCGCGAGGCAACCAGGACCATGTCTCCGTGATTAAGGAGTACAGA
TCGAAGATCGAGGCCGAGTTGACGGAGATCTGTGGCGGGATCTTGAAATT
ATTGGACCAGAAATTGGTTCCCGCCGCTGCCGCTGCCGATTCCAAGGTGT
TTTATTTGAAGATGAAGGGAGATTATCATAGGTACTTGGCCGAGTTTAAG
ACTGGCGATGAGAGGAAAGTCGCCGCTGAGAATACTCTTAATGCCTATAA
ATCTGCTCAGGATATTGCAAATGCTGAACTGGCGCCAACTCATCCTATCC
GGCTAGGACTGGCTCTGAACTTCTCTGTGTTTTACTATGAGATTTTGAAC
TCTCCCGATAGAGCCTGGTACCCTTGCAACAGGCCTTTGATGAAGCATC
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